Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 AC004808.2-201ENST00000627965 773 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 BIN2P1-201ENST00000504996 1530 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL20A1Q9P218 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 CYP2G2P-201ENST00000594920 1485 ntBASIC7.11□□□□□ -1.27
COL20A1Q9P218 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
COL20A1Q9P218 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AP002370.1-201ENST00000528055 1602 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AL445238.1-204ENST00000400311 463 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 AL139039.2-201ENST00000407436 479 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 IGLV3-4-201ENST00000432300 244 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 BZW1P1-201ENST00000454901 1240 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 SEPT7P6-201ENST00000469999 1143 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 RPL37AP8-201ENST00000494116 276 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC010343.2-201ENST00000510162 224 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 RN7SKP238-201ENST00000516483 249 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 OR8K2P-201ENST00000524645 927 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC067773.1-201ENST00000603284 1094 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AL136097.3-201ENST00000611097 505 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AL591848.4-201ENST00000567832 3472 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 PSG10P-201ENST00000501199 1500 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
COL20A1Q9P218 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC092821.2-201ENST00000545710 2042 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC105749.1-201ENST00000631338 2008 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL20A1Q9P218 AC008627.1-201ENST00000517511 1704 ntBASIC7.1□□□□□ -1.27
COL20A1Q9P218 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC110373.1-201ENST00000505994 3505 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC024341.1-201ENST00000526444 1552 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC241584.2-201ENST00000637142 2090 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 OR11H13P-201ENST00000359695 979 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC013470.3-201ENST00000420252 1194 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC007064.3-201ENST00000422608 359 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 RPS6P14-201ENST00000425165 719 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 MTCO1P57-201ENST00000432182 261 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 RPL6P30-201ENST00000443382 862 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.09□□□□□ -1.27
COL20A1Q9P218 MGAT2P1-201ENST00000449718 797 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 AC002553.3-201ENST00000453002 341 ntBASIC7.09□□□□□ -1.27
COL20A1Q9P218 RANP2-201ENST00000456833 229 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms