Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AL355834.1-201ENST00000556602 3965 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 RNA5SP85-201ENST00000365378 119 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 MIR27A-201ENST00000385073 78 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC121334.1-201ENST00000396414 802 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC003045.1-201ENST00000398779 713 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC073410.1-201ENST00000435125 589 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 SLAMF6P1-201ENST00000451067 602 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AL133351.3-201ENST00000454998 193 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 EIF3LP2-201ENST00000457262 807 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AL079303.1-201ENST00000486611 463 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC090058.1-201ENST00000498788 435 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 KHDC1P1-201ENST00000511053 508 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC125494.2-201ENST00000602431 657 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AL512430.4-201ENST00000603085 613 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC008555.7-201ENST00000605008 583 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC018690.1-201ENST00000608144 626 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC027506.1-201ENST00000621395 198 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 AC005224.3-201ENST00000584683 2140 ntBASIC5.77□□□□□ -1.49
VAPAQ9P0L0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VAPAQ9P0L0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC024651.2-201ENST00000562480 2098 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC123769.1-201ENST00000530992 3192 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 RNA5SP346-201ENST00000363541 121 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AL157702.1-201ENST00000398764 426 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AL033519.1-201ENST00000407266 307 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 UBTFL2-201ENST00000411859 1191 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 SETP9-201ENST00000423837 832 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 RPL7AP14-201ENST00000424041 802 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 KRT8P51-201ENST00000438938 274 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AL512593.1-201ENST00000444758 779 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC073648.3-201ENST00000504939 925 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC084851.2-201ENST00000530377 364 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 NIFKP4-201ENST00000567275 1192 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 SNORA74.4-201ENST00000607595 199 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC011416.1-201ENST00000514947 1732 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 AC004014.2-201ENST00000623718 5122 ntBASIC5.76□□□□□ -1.49
VAPAQ9P0L0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VAPAQ9P0L0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms