Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF2Q9HAU5 AC024651.2-201ENST00000562480 2098 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AC123769.1-201ENST00000530992 3192 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AC024587.1-201ENST00000505925 2157 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AC010894.1-201ENST00000313760 361 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 PTCD2P2-201ENST00000415579 1095 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL161742.1-201ENST00000418154 584 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL645939.3-201ENST00000435408 225 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 RPSAP40-201ENST00000442343 891 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL929410.2-201ENST00000451170 189 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 RBMY2EP-202ENST00000456360 940 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AC079080.1-201ENST00000479841 822 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 RPS10P28-201ENST00000480396 498 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL079303.1-201ENST00000486611 463 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 CCDC11P1-201ENST00000503137 1162 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 SNX18P24-201ENST00000505249 671 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 RNA5SP418-201ENST00000515951 117 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AP001858.2-201ENST00000536213 601 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AC025857.2-201ENST00000602711 238 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL353807.4-201ENST00000604995 257 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL589743.6-201ENST00000611025 117 ntBASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF2Q9HAU5 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AC005224.3-201ENST00000584683 2140 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 RNU1-49P-201ENST00000363468 159 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AC026310.1-201ENST00000396004 378 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 RN7SKP121-201ENST00000410842 305 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 NFU1P1-201ENST00000413128 774 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 RN7SL413P-201ENST00000482700 297 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AC141002.1-201ENST00000607025 279 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 RN7SL261P-201ENST00000613441 282 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AC103564.3-201ENST00000621194 220 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 AC005355.2-201ENST00000625064 484 ntBASIC7.42□□□□□ -1.22
UPF2Q9HAU5 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF2Q9HAU5 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AP002833.3-201ENST00000625075 2265 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 THAP12P9-201ENST00000503971 2360 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC009220.2-201ENST00000489759 1751 ntBASIC7.41□□□□□ -1.22
UPF2Q9HAU5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF2Q9HAU5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms