Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LITAFQ99732 RNU6-298P-201ENST00000390888 96 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 OR7E91P-201ENST00000400027 866 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 RFKP1-201ENST00000400940 428 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 HMGB3P19-201ENST00000403971 560 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 MED15P8-201ENST00000411601 545 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC015977.1-201ENST00000418887 292 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 VN1R42P-201ENST00000424651 344 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AL590399.2-201ENST00000427536 309 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 MTCO1P51-201ENST00000427672 1060 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 RPL10P5-201ENST00000427719 639 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 FO393414.1-201ENST00000428697 1184 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 CYP2C56P-201ENST00000440076 291 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 REG1CP-206ENST00000447469 496 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AL627224.1-201ENST00000448334 444 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AL135929.1-201ENST00000449287 552 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 SAP18P3-201ENST00000449663 396 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 VN1R38P-201ENST00000450265 887 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 WBP1LP1-201ENST00000460451 896 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 CYCSP20-201ENST00000473154 315 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 EIF1P7-201ENST00000487533 337 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 RN7SL518P-201ENST00000491887 280 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC010627.1-201ENST00000503819 1294 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC119751.5-201ENST00000514077 770 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC008429.4-201ENST00000521201 182 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 OR5M6P-201ENST00000530227 937 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AL132857.1-201ENST00000555180 708 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.37□□□□□ -1.71
LITAFQ99732 DHFRP1-201ENST00000579682 559 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 SCML2P1-201ENST00000584511 1100 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.37□□□□□ -1.71
LITAFQ99732 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC234772.3-201ENST00000602277 528 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC005034.4-201ENST00000603612 899 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 OR7A19P-201ENST00000608051 733 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AL731556.2-201ENST00000615610 770 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC019080.5-201ENST00000624891 757 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 AC000095.2-202ENST00000637415 154 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 CDY11P-201ENST00000447168 1651 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 AC139426.3-201ENST00000605648 2059 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.37□□□□□ -1.71
LITAFQ99732 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 MEST-203ENST00000378576 2180 ntTSL 5 BASIC4.37□□□□□ -1.71
LITAFQ99732 CR788268.1-201ENST00000603931 1809 ntBASIC4.37□□□□□ -1.71
LITAFQ99732 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LITAFQ99732 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LITAFQ99732 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LITAFQ99732 MTCO1P15-201ENST00000529569 1526 ntBASIC4.36□□□□□ -1.71
LITAFQ99732 AC102941.1-201ENST00000567616 1537 ntBASIC4.36□□□□□ -1.71
LITAFQ99732 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.36□□□□□ -1.71
LITAFQ99732 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.36□□□□□ -1.71
LITAFQ99732 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
LITAFQ99732 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LITAFQ99732 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.36□□□□□ -1.71
LITAFQ99732 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LITAFQ99732 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LITAFQ99732 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC4.36□□□□□ -1.71
LITAFQ99732 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms