Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL589743.6-201ENST00000611025 117 ntBASIC6.9□□□□□ -1.3
CDK5RAP1Q96SZ6 AP000676.4-201ENST00000624659 623 ntBASIC6.9□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP1Q96SZ6 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CDK5RAP1Q96SZ6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CDK5RAP1Q96SZ6 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.9□□□□□ -1.3
CDK5RAP1Q96SZ6 MTND4P10-201ENST00000446199 1363 ntBASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 CASC19-261ENST00000641853 1638 ntBASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 CUBNP3-201ENST00000457461 1784 ntBASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CDK5RAP1Q96SZ6 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 LPAL2-203ENST00000454031 2498 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC083806.2-201ENST00000617795 2685 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 RNU4-23P-201ENST00000362839 140 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 RNA5SP85-201ENST00000365378 119 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 SNORA64.3-201ENST00000365647 134 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 U3.52-201ENST00000384034 216 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC245036.1-201ENST00000391727 309 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 RN7SKP188-201ENST00000410789 317 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC069282.1-201ENST00000411911 526 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MTCO2P8-201ENST00000412213 658 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MTND4P22-201ENST00000413116 1169 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MTCO2P21-201ENST00000419780 677 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 Z68868.1-201ENST00000429048 544 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 RRM2P4-201ENST00000441721 562 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC092349.1-201ENST00000504903 310 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC083906.1-201ENST00000509298 406 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC112673.1-201ENST00000513168 575 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 SCARNA5-201ENST00000516201 276 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 TDGP1-201ENST00000543961 1229 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MRPS36P5-201ENST00000551909 298 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 NEK2P4-201ENST00000425793 1329 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AL512310.3-201ENST00000547023 1335 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 AL513548.1-201ENST00000562904 1724 ntBASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CDK5RAP1Q96SZ6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 AC007485.2-201ENST00000623493 1667 ntBASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 AP000641.1-201ENST00000531988 1639 ntBASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.88□□□□□ -1.31
CDK5RAP1Q96SZ6 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms