Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 KIF4CP-201ENST00000422742 1279 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 GAPDHP19-201ENST00000431768 1005 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 VN1R38P-201ENST00000450265 887 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 RPL31P53-201ENST00000457065 348 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 RPL17P2-201ENST00000491913 451 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC114324.2-202ENST00000503812 134 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC131392.1-201ENST00000506490 633 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC093870.1-201ENST00000506837 213 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 RNA5SP116-201ENST00000516132 98 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC084337.1-201ENST00000524809 686 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC092718.4-201ENST00000566639 716 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC245052.7-201ENST00000601161 359 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC005972.3-201ENST00000606304 481 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC097641.3-201ENST00000613523 464 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC012676.3-201ENST00000614983 479 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AL132640.3-201ENST00000630473 177 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AC139426.3-201ENST00000605648 2059 ntBASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CHMP4CQ96CF2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC073365.1-203ENST00000641055 1992 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC119674.1-213ENST00000641177 1386 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 RNA5SP279-201ENST00000365513 117 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 RNU6-883P-201ENST00000384597 107 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC245036.1-201ENST00000391727 309 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 RPL24P2-201ENST00000421023 475 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AL356806.1-201ENST00000422524 916 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AJ239321.1-201ENST00000424255 564 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AL139158.1-201ENST00000424719 340 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AKR1B10P1-201ENST00000425765 942 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AL590623.1-201ENST00000427864 105 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC097359.1-201ENST00000447946 463 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC005014.3-201ENST00000605985 190 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC105235.1-201ENST00000623208 1816 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 AC011455.2-201ENST00000599320 3336 ntBASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CHMP4CQ96CF2 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL513548.1-201ENST00000562904 1724 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 RN7SKP250-201ENST00000363924 321 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 THEM7P-201ENST00000419556 672 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 RPL12P43-201ENST00000420608 499 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL392003.1-201ENST00000434394 243 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 COL11A2P1-205ENST00000441798 676 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms