Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC089984.3-201ENST00000552838 363 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 AL137000.1-201ENST00000610528 1244 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 MIR6883-201ENST00000614952 78 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 RNU6-368P-201ENST00000620928 107 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 RNU6-538P-201ENST00000622329 107 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.8□□□□□ -1.48
PTP4A1Q93096 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 UGT2B24P-201ENST00000514441 1597 ntBASIC5.8□□□□□ -1.48
PTP4A1Q93096 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTP4A1Q93096 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 PSMC1P4-201ENST00000515236 1327 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AL360271.1-201ENST00000395679 510 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 RPL5P20-201ENST00000403848 896 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 CYP4F30P-202ENST00000420048 405 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 RPL23AP85-201ENST00000421838 433 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AL672212.1-201ENST00000422246 400 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 BMS1P11-201ENST00000442351 885 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 RAB28P3-201ENST00000448325 597 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 VN1R38P-201ENST00000450265 887 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 BMS1P9-201ENST00000457640 885 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC008868.1-201ENST00000509786 737 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC027026.1-201ENST00000532323 742 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC005000.1-201ENST00000536192 288 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC007671.1-201ENST00000616957 830 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC127071.2-201ENST00000623293 527 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 AL355834.1-201ENST00000556602 3965 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 RLIMP2-201ENST00000427891 1563 ntBASIC5.79□□□□□ -1.48
PTP4A1Q93096 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PTP4A1Q93096 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTP4A1Q93096 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTP4A1Q93096 AC087516.1-201ENST00000561236 2428 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTP4A1Q93096 SMG1P7-201ENST00000565246 2704 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.78□□□□□ -1.48
PTP4A1Q93096 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTP4A1Q93096 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTP4A1Q93096 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTP4A1Q93096 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTP4A1Q93096 RNA5SP382-201ENST00000363355 112 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 RN7SKP237-201ENST00000364663 301 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 RN7SKP191-201ENST00000364713 306 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PTP4A1Q93096 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.78□□□□□ -1.48
PTP4A1Q93096 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTP4A1Q93096 U3.43-201ENST00000410734 213 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 RPL18AP14-201ENST00000417685 526 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.78□□□□□ -1.48
PTP4A1Q93096 AC003989.1-201ENST00000434569 565 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.78□□□□□ -1.48
PTP4A1Q93096 C1DP3-201ENST00000455013 423 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 RN7SL372P-201ENST00000461982 298 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 AC107015.1-201ENST00000466902 747 ntBASIC5.78□□□□□ -1.48
PTP4A1Q93096 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTP4A1Q93096 AC022336.1-201ENST00000475510 337 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms