Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC092634.1-201ENST00000366505 199 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC026310.1-201ENST00000396004 378 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 NPM1P37-201ENST00000403105 874 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 TMA16P2-201ENST00000413187 601 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC006509.1-201ENST00000420788 634 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 VN1R53P-201ENST00000429536 957 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 MED28P4-201ENST00000433137 572 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC092106.2-201ENST00000436597 487 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC068491.1-201ENST00000449539 1241 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 SNX18P26-201ENST00000458433 740 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 OR4C49P-201ENST00000563891 900 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC233702.7-202ENST00000582941 211 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 MIR7854-201ENST00000620068 65 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC063952.1-203ENST00000634410 658 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC099654.3-201ENST00000447087 1546 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AP005435.3-201ENST00000531260 3198 ntBASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLIP4Q8N3C7 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 FANCD2P2-201ENST00000437591 1400 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 BIN2P1-201ENST00000504996 1530 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AP000568.1-201ENST00000282964 442 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 RNU1-59P-201ENST00000364829 162 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 LCN1P2-201ENST00000372030 223 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC019178.1-201ENST00000392337 440 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AL391419.1-201ENST00000398901 1275 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 ZNF37CP-201ENST00000406795 241 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 RNA5SP231-201ENST00000410496 138 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 OR52N3P-201ENST00000413417 934 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 MRPS21P5-201ENST00000417885 231 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 ELOCP6-201ENST00000429066 328 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AL354893.1-201ENST00000433735 348 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 XKRYP6-201ENST00000440468 1116 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 XKRYP3-201ENST00000442113 1116 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 BMS1P11-201ENST00000442351 885 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AL020997.1-201ENST00000446554 349 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 BMS1P9-201ENST00000457640 885 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 ELOCP12-201ENST00000458706 328 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 SLC25A51P1-201ENST00000468432 871 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AL079303.1-201ENST00000486611 463 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC009567.2-201ENST00000502989 349 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 SNORD116-30-201ENST00000516468 85 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AP000619.2-201ENST00000546014 969 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AC138473.1-201ENST00000605717 526 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 AL512413.1-201ENST00000606489 382 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 U1.25-201ENST00000614085 162 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 MIR6085-201ENST00000618314 110 ntBASIC5.91□□□□□ -1.46
CLIP4Q8N3C7 U1.34-201ENST00000618578 162 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms