Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 E2F6P1-201ENST00000428850 745 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AL606490.7-201ENST00000433136 191 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AL590399.4-201ENST00000436561 601 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 E2F6P3-201ENST00000441743 743 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC022080.2-201ENST00000452932 533 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 TREML3P-201ENST00000457327 501 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 SCARNA5-201ENST00000516201 276 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 IGHV1-14-201ENST00000523391 241 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AP005639.1-201ENST00000526939 192 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC073916.1-201ENST00000545095 130 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC005726.4-201ENST00000582858 458 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 OR7E19P-202ENST00000589942 844 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AL512430.4-201ENST00000603085 613 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AP004372.1-201ENST00000604842 844 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 U1.41-201ENST00000617626 165 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC015660.5-201ENST00000623238 564 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AC034229.2-201ENST00000566945 2508 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 MSL3P1-202ENST00000440028 1468 ntBASIC5.71□□□□□ -1.5
LINC00346Q8IVM7 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 SAGE3P-201ENST00000619800 1635 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 HSPD1P7-201ENST00000447985 1686 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 AC105235.1-201ENST00000623208 1816 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 OR7A2P-201ENST00000304105 930 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 AC074375.1-201ENST00000372993 192 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 MIR137-201ENST00000385223 102 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 RNA5SP231-201ENST00000410496 138 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 GABARAPL3-201ENST00000412799 354 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 NME1P1-201ENST00000420914 382 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 RPL23AP85-201ENST00000421838 433 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 BMS1P11-201ENST00000442351 885 ntBASIC5.7□□□□□ -1.5
LINC00346Q8IVM7 VN1R38P-201ENST00000450265 887 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms