Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SNRPEP5-201ENST00000425442 278 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 GAPDHP69-201ENST00000425504 1008 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 CHCHD4P5-201ENST00000436684 427 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AL356121.1-201ENST00000442911 156 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 RPL21P33-201ENST00000444831 484 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 RNU6-775P-201ENST00000459318 96 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC104629.2-201ENST00000468627 598 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC093815.1-201ENST00000508637 280 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC022784.5-201ENST00000522241 437 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AP001803.1-201ENST00000525668 147 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AP005639.1-201ENST00000526939 192 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC122134.1-201ENST00000565664 1104 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC010487.1-201ENST00000594408 1172 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 RMST_5.1-201ENST00000618704 126 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC005753.1-201ENST00000623837 618 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC024651.2-201ENST00000562480 2098 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 AC093849.1-201ENST00000563631 2209 ntBASIC5.71□□□□□ -1.5
C11orf88Q6PI97 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.71□□□□□ -1.5
C11orf88Q6PI97 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AC087565.3-202ENST00000642085 1603 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AL031595.2-201ENST00000624215 19071 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 LYARP1-201ENST00000436977 1501 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 RN7SKP47-201ENST00000365347 328 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AL360271.1-201ENST00000395679 510 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 EEF1GP6-201ENST00000402309 905 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 RNU6-564P-201ENST00000410983 104 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 DSTNP5-201ENST00000427921 523 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 HMGB3P10-201ENST00000434734 572 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 PSMA6P2-201ENST00000457574 686 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AL591122.1-201ENST00000487348 492 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 RPL5P33-201ENST00000487833 905 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 RPL10P7-201ENST00000495649 625 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 MRPS5P3-201ENST00000515577 166 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AP001646.2-201ENST00000528645 1156 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AP006587.5-201ENST00000532033 739 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AC018552.1-201ENST00000562099 811 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 WDR45BP1-201ENST00000583470 1029 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 MIR4420-201ENST00000583944 77 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 WBP1LP11-201ENST00000586141 328 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AL122125.1-201ENST00000616999 600 ntBASIC5.7□□□□□ -1.5
C11orf88Q6PI97 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms