Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 RN7SKP118-201ENST00000364331 330 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AP003385.1-201ENST00000426387 893 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 HMGN2P27-201ENST00000427352 270 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 UBBP5-201ENST00000446970 266 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 NPM1P9-201ENST00000453156 844 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 SULT1D1P-201ENST00000458020 882 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC114728.1-201ENST00000488289 483 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC083906.1-201ENST00000509298 406 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 RNA5SP96-201ENST00000516041 107 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 RNU2-45P-201ENST00000516068 187 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 IGLV3-6-201ENST00000523937 250 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC131935.1-201ENST00000524621 333 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 NIFKP4-201ENST00000567275 1192 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC018809.2-201ENST00000602436 3823 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AL953862.2-201ENST00000603089 820 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC093635.1-201ENST00000609028 555 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 MIR6774-201ENST00000614651 70 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC005277.2-201ENST00000617898 390 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AL353763.1-201ENST00000624467 1628 ntBASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TMEM53Q6P2H8 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC010132.4-201ENST00000569883 1368 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 PSMC1P4-201ENST00000515236 1327 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC022613.3-201ENST00000560740 1346 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 RNU1-46P-201ENST00000384425 164 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL589794.1-201ENST00000424971 390 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 E2F6P1-201ENST00000428850 745 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL365220.1-201ENST00000432923 399 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 RPL5P25-201ENST00000441148 775 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 RPS19P6-201ENST00000441327 433 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 E2F6P3-201ENST00000441743 743 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL139156.3-201ENST00000454802 394 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC005017.1-201ENST00000482002 490 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 RN7SL655P-201ENST00000486087 298 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 RPL5P33-201ENST00000487833 905 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC009567.2-201ENST00000502989 349 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 OR52H2P-201ENST00000514607 902 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL356986.1-201ENST00000604085 341 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AC005393.1-201ENST00000617916 584 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 AL353796.1-201ENST00000561542 3241 ntBASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEM53Q6P2H8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms