Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AC016908.1-201ENST00000442571 1219 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 VPS25P1-201ENST00000455691 508 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 RPA2P1-201ENST00000556557 721 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 MIR3189-201ENST00000578735 73 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 RPL12P48-201ENST00000605620 304 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AC018690.1-201ENST00000608144 626 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AC005261.2-201ENST00000593427 4258 ntBASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.23□□□□□ -1.25
SHROOM1Q2M3G4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 TMSB4XP4-201ENST00000323496 618 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 RN7SKP292-201ENST00000365522 317 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AL096829.1-201ENST00000413677 457 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC009237.1-201ENST00000442127 744 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC073594.1-201ENST00000462065 364 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 RN7SL174P-201ENST00000475578 289 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 PPIAP19-201ENST00000486414 492 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC010343.2-201ENST00000510162 224 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC125612.1-201ENST00000547580 377 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC135626.1-201ENST00000556983 435 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC092121.1-201ENST00000569452 202 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 AL357562.1-201ENST00000624911 609 ntBASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.22□□□□□ -1.25
SHROOM1Q2M3G4 NCOA4P3-201ENST00000513203 1877 ntBASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SHROOM1Q2M3G4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 FUNDC2P3-201ENST00000334716 533 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 RNA5SP284-201ENST00000384547 118 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 RPL35AP31-201ENST00000418340 337 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AC079355.1-201ENST00000421770 223 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 RPL12P12-201ENST00000424633 501 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AC005077.1-201ENST00000449226 375 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 RN7SL269P-201ENST00000467795 305 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AC233702.7-202ENST00000582941 211 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AL445647.2-201ENST00000615170 130 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AL137067.2-201ENST00000621202 131 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AC105235.1-201ENST00000623208 1816 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 AC025809.2-201ENST00000625085 1802 ntBASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SHROOM1Q2M3G4 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms