Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
HSPG2P98160 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HSPG2P98160 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC3.59□□□□□ -1.83
HSPG2P98160 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC3.59□□□□□ -1.83
HSPG2P98160 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
HSPG2P98160 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.59□□□□□ -1.84
HSPG2P98160 AC011379.1-201ENST00000508713 3025 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC3.59□□□□□ -1.84
HSPG2P98160 SNORA16A-201ENST00000384342 137 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 AL713922.1-201ENST00000416477 747 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 RPL18P10-201ENST00000425606 538 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.59□□□□□ -1.84
HSPG2P98160 SDC4P-201ENST00000453285 601 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 AC109462.1-201ENST00000491087 368 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 C1GALT1P3-201ENST00000522049 819 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 RPA2P3-201ENST00000533268 770 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 DCN-209ENST00000546745 1026 ntTSL 3 BASIC3.59□□□□□ -1.84
HSPG2P98160 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC3.59□□□□□ -1.84
HSPG2P98160 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
HSPG2P98160 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.59□□□□□ -1.84
HSPG2P98160 AC016717.3-201ENST00000624730 554 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
HSPG2P98160 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
HSPG2P98160 DYNC1I2P1-201ENST00000435916 1838 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
HSPG2P98160 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HSPG2P98160 CEP41-217ENST00000541543 6222 ntTSL 2 BASIC3.59□□□□□ -1.84
HSPG2P98160 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC3.59□□□□□ -1.84
HSPG2P98160 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC3.59□□□□□ -1.84
HSPG2P98160 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HSPG2P98160 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HSPG2P98160 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HSPG2P98160 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HSPG2P98160 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC3.59□□□□□ -1.84
HSPG2P98160 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.84
HSPG2P98160 HSPA8P14-201ENST00000552265 1805 ntBASIC3.59□□□□□ -1.84
HSPG2P98160 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HSPG2P98160 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HSPG2P98160 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
HSPG2P98160 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
HSPG2P98160 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 RN7SKP28-201ENST00000364770 305 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC3.58□□□□□ -1.84
HSPG2P98160 TPT1P13-201ENST00000449760 499 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.58□□□□□ -1.84
HSPG2P98160 RPS18P6-201ENST00000476880 458 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.58□□□□□ -1.84
HSPG2P98160 MIR1254-2-201ENST00000579553 63 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.58□□□□□ -1.84
HSPG2P98160 OR52H1-202ENST00000641796 1061 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC3.58□□□□□ -1.84
HSPG2P98160 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 HSPA8P18-201ENST00000439846 1928 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC3.58□□□□□ -1.84
HSPG2P98160 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HSPG2P98160 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 SNORA62-201ENST00000365493 153 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HSPG2P98160 AL139415.1-201ENST00000424862 352 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AC234779.1-201ENST00000425910 285 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AC234781.3-201ENST00000452540 973 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AC013701.1-201ENST00000522657 465 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HSPG2P98160 AC091193.1-201ENST00000604640 448 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC3.58□□□□□ -1.84
HSPG2P98160 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 AL359091.1-201ENST00000449048 1734 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC3.58□□□□□ -1.84
HSPG2P98160 SNORA17.1-201ENST00000362945 126 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HSPG2P98160 AL023284.3-201ENST00000407767 334 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.58□□□□□ -1.84
HSPG2P98160 AC126120.1-201ENST00000431082 470 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AC009127.1-201ENST00000467090 155 ntBASIC3.58□□□□□ -1.84
HSPG2P98160 AC114728.1-201ENST00000488289 483 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms