Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC245291.3-201ENST00000443400 292 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 REG1CP-206ENST00000447469 496 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 HIGD1AP16-201ENST00000450986 258 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AL133351.3-201ENST00000454998 193 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC099670.1-201ENST00000455141 783 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 CEACAMP11-201ENST00000455211 583 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC112187.1-201ENST00000455837 479 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC073594.1-201ENST00000462065 364 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 SLC25A51P1-201ENST00000468432 871 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AL355032.1-201ENST00000472981 438 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 NATP-201ENST00000523491 878 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC036111.2-201ENST00000533247 901 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC007494.1-201ENST00000562293 760 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AL122023.1-201ENST00000622847 530 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 AC011416.1-201ENST00000514947 1732 ntBASIC5.42□□□□□ -1.54
HIST1H3AP68431 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HIST1H3AP68431 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.42□□□□□ -1.54
HIST1H3AP68431 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC139426.3-201ENST00000605648 2059 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 RPL11P4-201ENST00000332269 436 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 YWHAZP4-201ENST00000392459 708 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 AL121835.1-201ENST00000404250 354 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 OR5W1P-201ENST00000423705 938 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC234771.2-201ENST00000445718 597 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 RPL23AP60-201ENST00000450011 454 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC004890.1-201ENST00000461005 181 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 RPS7P10-201ENST00000464254 603 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 CR383656.1-201ENST00000484916 377 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 RNA5SP434-201ENST00000516647 121 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 IGKV2-19-201ENST00000518132 283 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC009120.7-201ENST00000623452 780 ntBASIC5.41□□□□□ -1.54
HIST1H3AP68431 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
HIST1H3AP68431 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HIST1H3AP68431 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.4□□□□□ -1.54
HIST1H3AP68431 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
HIST1H3AP68431 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms