Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 AC245036.1-201ENST00000391727 309 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 RPS26P38-201ENST00000414476 348 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN20P56880 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLDN20P56880 AL139184.1-202ENST00000422303 222 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN20P56880 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 TAAR4P-201ENST00000454843 1039 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 RARRES2P3-201ENST00000457739 473 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 AC005165.2-201ENST00000466070 380 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 AC092824.1-201ENST00000483524 576 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 IGLV3-6-201ENST00000523937 250 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.85□□□□□ -1.47
CLDN20P56880 AL133399.1-201ENST00000527476 298 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC124891.1-201ENST00000536322 519 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC019257.2-201ENST00000605539 497 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN20P56880 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 MRPL57P1-201ENST00000621486 265 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 AP000432.2-201ENST00000624164 2048 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 SMG1P5-202ENST00000529428 4219 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 SMG1P2-201ENST00000566127 4221 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN20P56880 AC078880.4-201ENST00000617627 1749 ntBASIC5.85□□□□□ -1.47
CLDN20P56880 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN20P56880 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN20P56880 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN20P56880 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN20P56880 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN20P56880 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CLDN20P56880 RNA5SP485-201ENST00000365053 119 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.84□□□□□ -1.47
CLDN20P56880 RPS17P17-201ENST00000419392 409 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AL139415.1-201ENST00000424862 352 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC097721.1-201ENST00000427150 1253 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 SUMO2P8-201ENST00000434672 286 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC010086.1-201ENST00000437359 1052 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.84□□□□□ -1.47
CLDN20P56880 AL513343.1-201ENST00000451818 792 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN20P56880 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 TPRKBP1-201ENST00000456243 481 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 RN7SL39P-201ENST00000462264 297 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 MARK2P8-201ENST00000476069 952 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC022206.1-201ENST00000495947 347 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC112184.1-201ENST00000505179 312 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC131392.1-201ENST00000506490 633 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC093815.1-201ENST00000508637 280 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN20P56880 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.84□□□□□ -1.47
CLDN20P56880 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC135983.3-201ENST00000528049 1226 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AP003033.2-201ENST00000528901 805 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC025423.2-201ENST00000537570 439 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC007494.1-201ENST00000562293 760 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms