Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN12P56749 RBMS2P1-201ENST00000525031 1226 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLDN12P56749 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN12P56749 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN12P56749 AL049779.3-201ENST00000557141 606 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 NPM1P5-201ENST00000557228 838 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
CLDN12P56749 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN12P56749 DYNLL1P1-201ENST00000595442 269 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN12P56749 AL136097.3-201ENST00000611097 505 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 MIR6731-201ENST00000614863 72 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 AL109924.4-201ENST00000623089 670 ntBASIC5.29□□□□□ -1.56
CLDN12P56749 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN12P56749 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
CLDN12P56749 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
CLDN12P56749 CASC19-260ENST00000641828 2001 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CLDN12P56749 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN12P56749 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 RNA5SP375-201ENST00000362975 119 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLDN12P56749 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 AL354868.1-201ENST00000417077 482 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN12P56749 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN12P56749 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN12P56749 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 KRT8P51-201ENST00000438938 274 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 AC022080.2-201ENST00000452932 533 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 RBMY2EP-202ENST00000456360 940 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 RN7SL369P-201ENST00000477138 299 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 RN7SL284P-201ENST00000498823 275 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 AC114940.1-201ENST00000512162 1265 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AC136777.2-201ENST00000522979 358 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN12P56749 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN12P56749 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN12P56749 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN12P56749 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 MIR4433B-201ENST00000581329 102 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AF186192.2-204ENST00000581667 524 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 SYPL1P2-201ENST00000582878 727 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 AC012175.1-201ENST00000603755 531 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 RPL12P48-201ENST00000605620 304 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AC022106.1-201ENST00000612834 766 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AL353684.1-201ENST00000622677 1120 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 AC069542.2-201ENST00000624816 216 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CLDN12P56749 SMG1P5-202ENST00000529428 4219 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 SMG1P2-201ENST00000566127 4221 ntBASIC5.28□□□□□ -1.56
CLDN12P56749 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLDN12P56749 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN12P56749 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN12P56749 AC011933.2-201ENST00000578539 2790 ntBASIC5.27□□□□□ -1.57
CLDN12P56749 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN12P56749 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN12P56749 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN12P56749 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN12P56749 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN12P56749 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CLDN12P56749 AL133243.2-201ENST00000610331 1621 ntBASIC5.27□□□□□ -1.57
CLDN12P56749 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CLDN12P56749 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN12P56749 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
CLDN12P56749 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN12P56749 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms