Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.05□□□□□ -1.44
CLDN6P56747 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.05□□□□□ -1.44
CLDN6P56747 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.05□□□□□ -1.44
CLDN6P56747 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.05□□□□□ -1.44
CLDN6P56747 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLDN6P56747 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CLDN6P56747 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.04□□□□□ -1.44
CLDN6P56747 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.04□□□□□ -1.44
CLDN6P56747 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.04□□□□□ -1.44
CLDN6P56747 AC083806.2-201ENST00000617795 2685 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.04□□□□□ -1.44
CLDN6P56747 AC119674.1-204ENST00000641348 1343 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.04□□□□□ -1.44
CLDN6P56747 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.04□□□□□ -1.44
CLDN6P56747 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.04□□□□□ -1.44
CLDN6P56747 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CLDN6P56747 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CLDN6P56747 IGLV3-4-201ENST00000432300 244 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.04□□□□□ -1.44
CLDN6P56747 AP000281.1-201ENST00000444036 316 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.04□□□□□ -1.44
CLDN6P56747 RN7SL561P-201ENST00000488553 281 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 IGHV4-55-201ENST00000520889 368 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.04□□□□□ -1.44
CLDN6P56747 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.04□□□□□ -1.44
CLDN6P56747 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.04□□□□□ -1.44
CLDN6P56747 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.04□□□□□ -1.44
CLDN6P56747 MIR5095-201ENST00000578844 88 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.04□□□□□ -1.44
CLDN6P56747 AC090616.1-201ENST00000583895 447 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.04□□□□□ -1.44
CLDN6P56747 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 AC005229.3-201ENST00000603438 323 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 CYCSP1-201ENST00000604815 315 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 AC120057.5-201ENST00000623840 154 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.04□□□□□ -1.44
CLDN6P56747 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.04□□□□□ -1.44
CLDN6P56747 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CLDN6P56747 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CLDN6P56747 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CLDN6P56747 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 AL591848.4-201ENST00000567832 3472 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLDN6P56747 AL596244.1-201ENST00000567068 3779 ntBASIC6.04□□□□□ -1.44
CLDN6P56747 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.04□□□□□ -1.44
CLDN6P56747 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.03□□□□□ -1.44
CLDN6P56747 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 AC009831.5-201ENST00000624000 3189 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 AC105114.1-201ENST00000624795 1862 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 AF287957.1-201ENST00000607368 1595 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CLDN6P56747 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CLDN6P56747 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 SNORA21-201ENST00000362423 132 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CLDN6P56747 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLDN6P56747 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.03□□□□□ -1.44
CLDN6P56747 AC130360.1-201ENST00000425489 1117 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.03□□□□□ -1.44
CLDN6P56747 AC002553.3-201ENST00000453002 341 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 RN7SL515P-201ENST00000463999 297 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 AC124945.1-201ENST00000485133 188 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 RN7SL193P-201ENST00000491708 276 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.03□□□□□ -1.44
CLDN6P56747 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.03□□□□□ -1.44
CLDN6P56747 PRMT5P1-201ENST00000514351 598 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 AC130365.2-201ENST00000525882 1201 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.03□□□□□ -1.44
CLDN6P56747 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.03□□□□□ -1.44
CLDN6P56747 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLDN6P56747 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.03□□□□□ -1.44
CLDN6P56747 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.03□□□□□ -1.44
CLDN6P56747 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.03□□□□□ -1.44
CLDN6P56747 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CLDN6P56747 AC073488.3-201ENST00000631611 778 ntBASIC6.03□□□□□ -1.44
CLDN6P56747 AL596275.2-208ENST00000641192 594 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms