Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HMGB3P24-201ENST00000433260 622 ntBASIC7.47□□□□□ -1.21
NUP98P52948 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 AC068522.1-201ENST00000482895 345 ntBASIC7.47□□□□□ -1.21
NUP98P52948 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.47□□□□□ -1.21
NUP98P52948 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.47□□□□□ -1.21
NUP98P52948 OR56A7P-201ENST00000524865 941 ntBASIC7.47□□□□□ -1.21
NUP98P52948 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 CR788268.1-201ENST00000603931 1809 ntBASIC7.47□□□□□ -1.21
NUP98P52948 AP000866.6-201ENST00000638898 3579 ntBASIC7.47□□□□□ -1.21
NUP98P52948 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 AC092111.1-201ENST00000618256 3358 ntBASIC7.47□□□□□ -1.21
NUP98P52948 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.47□□□□□ -1.21
NUP98P52948 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
NUP98P52948 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.46□□□□□ -1.21
NUP98P52948 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NUP98P52948 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NUP98P52948 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
NUP98P52948 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.21
NUP98P52948 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.46□□□□□ -1.21
NUP98P52948 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.46□□□□□ -1.21
NUP98P52948 RN7SL57P-201ENST00000493687 290 ntBASIC7.46□□□□□ -1.21
NUP98P52948 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
NUP98P52948 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.46□□□□□ -1.21
NUP98P52948 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.46□□□□□ -1.21
NUP98P52948 AC091078.2-201ENST00000557145 559 ntBASIC7.46□□□□□ -1.21
NUP98P52948 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.46□□□□□ -1.21
NUP98P52948 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.46□□□□□ -1.22
NUP98P52948 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NUP98P52948 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
NUP98P52948 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.46□□□□□ -1.22
NUP98P52948 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
NUP98P52948 TMEM75-201ENST00000624314 2165 ntBASIC7.46□□□□□ -1.22
NUP98P52948 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
NUP98P52948 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
NUP98P52948 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.46□□□□□ -1.22
NUP98P52948 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.46□□□□□ -1.22
NUP98P52948 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.46□□□□□ -1.22
NUP98P52948 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 OR10R3P-201ENST00000361688 942 ntBASIC7.45□□□□□ -1.22
NUP98P52948 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.45□□□□□ -1.22
NUP98P52948 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.45□□□□□ -1.22
NUP98P52948 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.45□□□□□ -1.22
NUP98P52948 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.45□□□□□ -1.22
NUP98P52948 RPL32P33-201ENST00000487023 394 ntBASIC7.45□□□□□ -1.22
NUP98P52948 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.45□□□□□ -1.22
NUP98P52948 RNU4ATAC-201ENST00000580972 127 ntBASIC7.45□□□□□ -1.22
NUP98P52948 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.45□□□□□ -1.22
NUP98P52948 AC020765.1-201ENST00000604296 328 ntBASIC7.45□□□□□ -1.22
NUP98P52948 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.45□□□□□ -1.22
NUP98P52948 AL445670.1-201ENST00000618889 801 ntBASIC7.45□□□□□ -1.22
NUP98P52948 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 RNA5SP375-201ENST00000362975 119 ntBASIC7.45□□□□□ -1.22
NUP98P52948 RN7SKP162-201ENST00000363605 345 ntBASIC7.45□□□□□ -1.22
NUP98P52948 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 MIR937-201ENST00000401271 86 ntBASIC7.45□□□□□ -1.22
NUP98P52948 AL596448.1-201ENST00000415024 392 ntBASIC7.45□□□□□ -1.22
NUP98P52948 RPS4XP5-201ENST00000419038 768 ntBASIC7.45□□□□□ -1.22
NUP98P52948 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.45□□□□□ -1.22
NUP98P52948 OR7E157P-201ENST00000494376 911 ntBASIC7.45□□□□□ -1.22
NUP98P52948 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 AC011497.2-201ENST00000600255 639 ntBASIC7.45□□□□□ -1.22
NUP98P52948 AC119501.1-201ENST00000603646 475 ntBASIC7.45□□□□□ -1.22
NUP98P52948 AL049840.6-201ENST00000604583 345 ntBASIC7.45□□□□□ -1.22
NUP98P52948 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.45□□□□□ -1.22
NUP98P52948 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.45□□□□□ -1.22
NUP98P52948 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
NUP98P52948 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.45□□□□□ -1.22
NUP98P52948 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUP98P52948 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.45□□□□□ -1.22
NUP98P52948 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.44□□□□□ -1.22
NUP98P52948 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 AC092821.2-201ENST00000545710 2042 ntBASIC7.44□□□□□ -1.22
NUP98P52948 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.44□□□□□ -1.22
NUP98P52948 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
NUP98P52948 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUP98P52948 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
NUP98P52948 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
NUP98P52948 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms