Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
SMARCA2P51531 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 EEF1A1P14-201ENST00000421195 1376 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SMARCA2P51531 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SMARCA2P51531 MAPK10-338ENST00000641647 3362 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
SMARCA2P51531 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
SMARCA2P51531 ITPK1-AS1-201ENST00000553639 4701 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SMARCA2P51531 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC10.65□□□□□ -0.7
SMARCA2P51531 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
SMARCA2P51531 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC10.65□□□□□ -0.7
SMARCA2P51531 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC10.65□□□□□ -0.7
SMARCA2P51531 AL591848.4-201ENST00000567832 3472 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SMARCA2P51531 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
SMARCA2P51531 RN7SKP166-201ENST00000410812 305 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 RPL23AP27-201ENST00000415161 451 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC10.65□□□□□ -0.7
SMARCA2P51531 HMGB3P24-201ENST00000433260 622 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 AL606490.1-201ENST00000452266 765 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 RN7SL172P-201ENST00000460535 303 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 RN7SL30P-201ENST00000488416 306 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC10.65□□□□□ -0.7
SMARCA2P51531 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC10.65□□□□□ -0.7
SMARCA2P51531 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC10.65□□□□□ -0.7
SMARCA2P51531 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.65□□□□□ -0.7
SMARCA2P51531 RNU4ATAC-201ENST00000580972 127 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 AC087269.2-201ENST00000641764 975 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMARCA2P51531 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC10.65□□□□□ -0.7
SMARCA2P51531 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
SMARCA2P51531 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
SMARCA2P51531 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMARCA2P51531 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMARCA2P51531 MRRFP1-201ENST00000435941 1675 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 AC007938.2-201ENST00000604666 2634 ntBASIC10.65□□□□□ -0.7
SMARCA2P51531 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMARCA2P51531 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
SMARCA2P51531 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
SMARCA2P51531 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SMARCA2P51531 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SMARCA2P51531 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SMARCA2P51531 AC011379.1-201ENST00000508713 3025 ntBASIC10.65□□□□□ -0.71
SMARCA2P51531 RN7SKP29-201ENST00000410957 272 ntBASIC10.65□□□□□ -0.71
SMARCA2P51531 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC10.65□□□□□ -0.71
SMARCA2P51531 METTL15P3-201ENST00000415522 1221 ntBASIC10.65□□□□□ -0.71
SMARCA2P51531 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC10.65□□□□□ -0.71
SMARCA2P51531 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC10.65□□□□□ -0.71
SMARCA2P51531 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC10.65□□□□□ -0.71
SMARCA2P51531 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC10.65□□□□□ -0.71
SMARCA2P51531 AL049872.1-201ENST00000556323 322 ntBASIC10.65□□□□□ -0.71
SMARCA2P51531 HCG18-243ENST00000602498 327 ntTSL 3 BASIC10.65□□□□□ -0.71
SMARCA2P51531 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC10.65□□□□□ -0.71
SMARCA2P51531 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
SMARCA2P51531 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA2P51531 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA2P51531 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA2P51531 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC10.64□□□□□ -0.71
SMARCA2P51531 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SMARCA2P51531 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
SMARCA2P51531 CASC19-205ENST00000641013 1411 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 AL136981.1-203ENST00000451452 3844 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA2P51531 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA2P51531 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA2P51531 OR10R3P-201ENST00000361688 942 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 U3.2-201ENST00000362981 210 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA2P51531 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC10.64□□□□□ -0.71
SMARCA2P51531 RPL23AP60-201ENST00000450011 454 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 OR2AO1P-201ENST00000476497 403 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 AC083795.1-201ENST00000491760 320 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SMARCA2P51531 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC10.64□□□□□ -0.71
SMARCA2P51531 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC10.64□□□□□ -0.71
SMARCA2P51531 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC10.64□□□□□ -0.71
SMARCA2P51531 SNORD91A-202ENST00000609620 191 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 AC005840.5-201ENST00000619166 599 ntBASIC10.64□□□□□ -0.71
SMARCA2P51531 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SMARCA2P51531 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA2P51531 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC10.64□□□□□ -0.71
SMARCA2P51531 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC10.63□□□□□ -0.71
SMARCA2P51531 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
SMARCA2P51531 AC092821.3-202ENST00000641304 2767 ntBASIC10.63□□□□□ -0.71
SMARCA2P51531 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA2P51531 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA2P51531 MROH3P-201ENST00000435735 2676 ntBASIC10.63□□□□□ -0.71
SMARCA2P51531 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA2P51531 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
SMARCA2P51531 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
SMARCA2P51531 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
SMARCA2P51531 RNA5SP478-201ENST00000364657 115 ntBASIC10.63□□□□□ -0.71
SMARCA2P51531 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC10.63□□□□□ -0.71
SMARCA2P51531 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms