Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
HOXA1P49639 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA1P49639 AL162233.1-201ENST00000620014 944 ntBASIC5.36□□□□□ -1.55
HOXA1P49639 AC008626.2-201ENST00000624425 248 ntBASIC5.36□□□□□ -1.55
HOXA1P49639 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXA1P49639 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA1P49639 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA1P49639 AL353763.1-201ENST00000624467 1628 ntBASIC5.36□□□□□ -1.55
HOXA1P49639 HSPD1P7-201ENST00000447985 1686 ntBASIC5.36□□□□□ -1.55
HOXA1P49639 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
HOXA1P49639 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA1P49639 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA1P49639 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA1P49639 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA1P49639 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
HOXA1P49639 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA1P49639 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA1P49639 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HOXA1P49639 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXA1P49639 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 CASC19-255ENST00000641733 1385 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 GOT2P1-201ENST00000440922 1309 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC022613.3-201ENST00000560740 1346 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 KYNUP3-201ENST00000574386 1341 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 AL589994.1-201ENST00000404962 340 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA1P49639 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA1P49639 HMGA1P8-201ENST00000414130 321 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC013268.2-201ENST00000420753 337 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 CR848007.2-201ENST00000424918 787 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 RPL12P16-201ENST00000431098 498 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 RPL17P35-201ENST00000432217 549 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AL365220.1-201ENST00000432923 399 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA1P49639 PSMD8P1-201ENST00000436275 769 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 RPS15AP29-201ENST00000445539 400 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 SCDP1-201ENST00000455244 1081 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC018475.1-201ENST00000478358 465 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HOXA1P49639 ATG10-AS1-201ENST00000504846 648 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC083906.1-201ENST00000509298 406 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC017007.1-201ENST00000511960 415 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA1P49639 IGHV1-14-201ENST00000523391 241 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 PHBP2-201ENST00000532859 806 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXA1P49639 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC024614.1-201ENST00000577546 307 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA1P49639 AC006272.2-201ENST00000594725 163 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 FRG2MP-201ENST00000613317 856 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AL512506.1-201ENST00000613918 449 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AC024884.1-201ENST00000620583 399 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA1P49639 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HOXA1P49639 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA1P49639 AC105749.1-201ENST00000631338 2008 ntBASIC5.35□□□□□ -1.55
HOXA1P49639 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA1P49639 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXA1P49639 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
HOXA1P49639 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA1P49639 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA1P49639 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HOXA1P49639 AP005432.1-201ENST00000580891 3485 ntBASIC5.34□□□□□ -1.55
HOXA1P49639 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.34□□□□□ -1.55
HOXA1P49639 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA1P49639 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA1P49639 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA1P49639 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms