Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC009237.1-201ENST00000442127 744 ntBASIC6.59□□□□□ -1.35
BRCC3P46736 FTLP8-201ENST00000446770 267 ntBASIC6.59□□□□□ -1.35
BRCC3P46736 AL359839.1-201ENST00000451975 1160 ntBASIC6.59□□□□□ -1.35
BRCC3P46736 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.59□□□□□ -1.35
BRCC3P46736 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.59□□□□□ -1.35
BRCC3P46736 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.59□□□□□ -1.35
BRCC3P46736 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.59□□□□□ -1.35
BRCC3P46736 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.59□□□□□ -1.35
BRCC3P46736 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.59□□□□□ -1.35
BRCC3P46736 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.59□□□□□ -1.35
BRCC3P46736 AC007956.1-201ENST00000555623 542 ntBASIC6.59□□□□□ -1.35
BRCC3P46736 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.59□□□□□ -1.35
BRCC3P46736 AP005119.1-201ENST00000580956 292 ntBASIC6.59□□□□□ -1.35
BRCC3P46736 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.59□□□□□ -1.35
BRCC3P46736 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BRCC3P46736 AC129915.3-201ENST00000634128 948 ntBASIC6.59□□□□□ -1.35
BRCC3P46736 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
BRCC3P46736 OR52B5P-204ENST00000641744 3467 ntBASIC6.59□□□□□ -1.35
BRCC3P46736 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
BRCC3P46736 CASC19-238ENST00000641523 1558 ntBASIC6.59□□□□□ -1.35
BRCC3P46736 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
BRCC3P46736 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
BRCC3P46736 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
BRCC3P46736 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.59□□□□□ -1.35
BRCC3P46736 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.59□□□□□ -1.35
BRCC3P46736 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
BRCC3P46736 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
BRCC3P46736 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.59□□□□□ -1.36
BRCC3P46736 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
BRCC3P46736 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 MAPK10-270ENST00000641102 3538 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 AC093829.1-201ENST00000506662 1618 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
BRCC3P46736 AC007406.5-201ENST00000570140 3170 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCC3P46736 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCC3P46736 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
BRCC3P46736 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 TMSB4XP2-201ENST00000335179 210 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
BRCC3P46736 OR7E25P-201ENST00000344844 931 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCC3P46736 AL096711.1-201ENST00000404780 554 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 AC245096.1-201ENST00000413104 546 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.58□□□□□ -1.36
BRCC3P46736 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCC3P46736 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 AC084754.1-201ENST00000463466 464 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 RNA5SP438-201ENST00000516561 112 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCC3P46736 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.58□□□□□ -1.36
BRCC3P46736 MIR3189-201ENST00000578735 73 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 RNU4ATAC-201ENST00000580972 127 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCC3P46736 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCC3P46736 AC108673.3-201ENST00000609183 335 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 AC096708.4-201ENST00000620563 552 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.58□□□□□ -1.36
BRCC3P46736 WBP11P1-201ENST00000562560 1931 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCC3P46736 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCC3P46736 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCC3P46736 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.58□□□□□ -1.36
BRCC3P46736 AL731556.1-201ENST00000394628 3711 ntBASIC6.58□□□□□ -1.36
BRCC3P46736 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
BRCC3P46736 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
BRCC3P46736 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
BRCC3P46736 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCC3P46736 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
BRCC3P46736 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
BRCC3P46736 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.57□□□□□ -1.36
BRCC3P46736 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCC3P46736 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCC3P46736 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BRCC3P46736 AC005034.3-201ENST00000604845 1747 ntBASIC6.57□□□□□ -1.36
BRCC3P46736 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.57□□□□□ -1.36
BRCC3P46736 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.57□□□□□ -1.36
BRCC3P46736 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCC3P46736 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.57□□□□□ -1.36
BRCC3P46736 RNU11-6P-201ENST00000391127 133 ntBASIC6.57□□□□□ -1.36
BRCC3P46736 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.57□□□□□ -1.36
BRCC3P46736 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.57□□□□□ -1.36
BRCC3P46736 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCC3P46736 RPS7P8-201ENST00000418311 581 ntBASIC6.57□□□□□ -1.36
BRCC3P46736 NAP1L4P2-201ENST00000425958 899 ntBASIC6.57□□□□□ -1.36
BRCC3P46736 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.57□□□□□ -1.36
BRCC3P46736 AC011742.2-201ENST00000443818 352 ntBASIC6.57□□□□□ -1.36
BRCC3P46736 AC073594.1-201ENST00000462065 364 ntBASIC6.57□□□□□ -1.36
BRCC3P46736 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BRCC3P46736 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.57□□□□□ -1.36
BRCC3P46736 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms