Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-1P43699 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-1P43699 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-1P43699 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-1P43699 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-1P43699 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-1P43699 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC022164.1-201ENST00000568767 2673 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AL080312.1-201ENST00000256654 824 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 RNU6-883P-201ENST00000384597 107 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 RNU11-6P-201ENST00000391127 133 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 UBBP1-201ENST00000392399 473 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AL096800.1-201ENST00000405326 893 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NKX2-1P43699 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 AL034379.1-201ENST00000423216 253 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 MTCO1P51-201ENST00000427672 1060 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.2□□□□□ -1.58
NKX2-1P43699 TXNP2-201ENST00000443918 295 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 SRP68P2-201ENST00000456184 254 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 MED28P7-201ENST00000456611 530 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AC089999.1-201ENST00000460336 374 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC106760.2-201ENST00000504159 619 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AC131392.1-201ENST00000506490 633 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 RNA5SP400-201ENST00000517155 111 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.2□□□□□ -1.58
NKX2-1P43699 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NKX2-1P43699 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC009120.3-201ENST00000563335 499 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 MRPL45P2-203ENST00000573318 473 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 RN7SL208P-201ENST00000577964 296 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX2-1P43699 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC012510.1-201ENST00000607946 759 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 MIR6737-201ENST00000617385 70 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC006328.2-201ENST00000623198 397 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC020923.1-201ENST00000624021 917 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AC012005.2-201ENST00000624333 397 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX2-1P43699 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NKX2-1P43699 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 AC125238.2-201ENST00000430003 1440 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-1P43699 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 CCNT2P1-201ENST00000423082 1315 ntBASIC5.2□□□□□ -1.58
NKX2-1P43699 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-1P43699 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC245100.2-201ENST00000454544 1679 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NKX2-1P43699 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NKX2-1P43699 RNU11-201ENST00000387069 134 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 NPM1P31-201ENST00000399021 764 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AL136100.1-201ENST00000407696 330 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 RN7SKP151-201ENST00000410230 316 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 RN7SKP129-201ENST00000410288 299 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 YWHAZP5-201ENST00000419975 730 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AL356806.1-201ENST00000422524 916 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms