Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 PARP4P2-201ENST00000446672 3326 ntBASIC6.72□□□□□ -1.33
SSR1P43307 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.72□□□□□ -1.33
SSR1P43307 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.72□□□□□ -1.33
SSR1P43307 SNORD8-201ENST00000363915 110 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AL391419.1-201ENST00000398901 1275 ntBASIC6.72□□□□□ -1.33
SSR1P43307 RN7SKP281-201ENST00000410472 352 ntBASIC6.72□□□□□ -1.33
SSR1P43307 RNA5SP115-201ENST00000411160 107 ntBASIC6.72□□□□□ -1.33
SSR1P43307 RPS17P17-201ENST00000419392 409 ntBASIC6.72□□□□□ -1.33
SSR1P43307 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.72□□□□□ -1.33
SSR1P43307 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.72□□□□□ -1.33
SSR1P43307 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.72□□□□□ -1.33
SSR1P43307 AC009237.1-201ENST00000442127 744 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 NPM1P19-201ENST00000450070 712 ntBASIC6.72□□□□□ -1.33
SSR1P43307 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.72□□□□□ -1.33
SSR1P43307 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.72□□□□□ -1.33
SSR1P43307 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.72□□□□□ -1.33
SSR1P43307 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.72□□□□□ -1.33
SSR1P43307 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.72□□□□□ -1.33
SSR1P43307 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 AC026956.1-201ENST00000558741 396 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.72□□□□□ -1.33
SSR1P43307 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.72□□□□□ -1.33
SSR1P43307 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.72□□□□□ -1.33
SSR1P43307 RN7SL32P-201ENST00000580514 281 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AC107993.1-201ENST00000591343 684 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AL591222.2-201ENST00000604443 754 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AC114477.1-201ENST00000605097 605 ntBASIC6.72□□□□□ -1.33
SSR1P43307 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.72□□□□□ -1.33
SSR1P43307 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.72□□□□□ -1.33
SSR1P43307 AL137246.2-201ENST00000613439 662 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.72□□□□□ -1.33
SSR1P43307 AF287957.1-201ENST00000607368 1595 ntBASIC6.72□□□□□ -1.33
SSR1P43307 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.72□□□□□ -1.33
SSR1P43307 AL603750.1-201ENST00000624216 1717 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AC011815.2-201ENST00000618230 2021 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AL353796.1-201ENST00000561542 3241 ntBASIC6.72□□□□□ -1.33
SSR1P43307 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.72□□□□□ -1.33
SSR1P43307 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSR1P43307 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSR1P43307 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSR1P43307 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SSR1P43307 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SSR1P43307 AC025470.1-201ENST00000510053 2032 ntBASIC6.71□□□□□ -1.33
SSR1P43307 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.71□□□□□ -1.34
SSR1P43307 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SSR1P43307 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSR1P43307 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SSR1P43307 FANCD2P2-201ENST00000437591 1400 ntBASIC6.71□□□□□ -1.34
SSR1P43307 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSR1P43307 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SSR1P43307 SNORD35A-201ENST00000363389 86 ntBASIC6.71□□□□□ -1.34
SSR1P43307 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.71□□□□□ -1.34
SSR1P43307 MRPS6P2-201ENST00000381143 370 ntBASIC6.71□□□□□ -1.34
SSR1P43307 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.71□□□□□ -1.34
SSR1P43307 AL157884.1-201ENST00000424561 454 ntBASIC6.71□□□□□ -1.34
SSR1P43307 AP003385.1-201ENST00000426387 893 ntBASIC6.71□□□□□ -1.34
SSR1P43307 AC092967.1-201ENST00000449016 481 ntBASIC6.71□□□□□ -1.34
SSR1P43307 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.71□□□□□ -1.34
SSR1P43307 RPS7P11-201ENST00000484240 586 ntBASIC6.71□□□□□ -1.34
SSR1P43307 AC091544.1-201ENST00000484702 348 ntBASIC6.71□□□□□ -1.34
SSR1P43307 RPL5P33-201ENST00000487833 905 ntBASIC6.71□□□□□ -1.34
SSR1P43307 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SSR1P43307 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.71□□□□□ -1.34
SSR1P43307 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.71□□□□□ -1.34
SSR1P43307 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.71□□□□□ -1.34
SSR1P43307 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.71□□□□□ -1.34
SSR1P43307 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.71□□□□□ -1.34
SSR1P43307 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
SSR1P43307 AC133552.4-201ENST00000576103 676 ntBASIC6.71□□□□□ -1.34
SSR1P43307 SYPL1P2-201ENST00000582878 727 ntBASIC6.71□□□□□ -1.34
SSR1P43307 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.71□□□□□ -1.34
SSR1P43307 AC069542.2-201ENST00000624816 216 ntBASIC6.71□□□□□ -1.34
SSR1P43307 AC096921.2-201ENST00000561507 1916 ntBASIC6.71□□□□□ -1.34
SSR1P43307 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSR1P43307 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SSR1P43307 HSPA8P14-201ENST00000552265 1805 ntBASIC6.71□□□□□ -1.34
SSR1P43307 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.71□□□□□ -1.34
SSR1P43307 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SSR1P43307 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSR1P43307 AC005702.3-201ENST00000585345 1447 ntBASIC6.7□□□□□ -1.34
SSR1P43307 AC004158.1-201ENST00000564508 4319 ntBASIC6.7□□□□□ -1.34
SSR1P43307 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SSR1P43307 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSR1P43307 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSR1P43307 RNU1-5P-201ENST00000362684 144 ntBASIC6.7□□□□□ -1.34
SSR1P43307 RN7SKP257-201ENST00000364525 309 ntBASIC6.7□□□□□ -1.34
SSR1P43307 RN7SKP81-201ENST00000365603 331 ntBASIC6.7□□□□□ -1.34
SSR1P43307 AC116036.1-201ENST00000412199 367 ntBASIC6.7□□□□□ -1.34
SSR1P43307 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms