Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.81□□□□□ -1.48
RFC3P40938 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
RFC3P40938 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.8□□□□□ -1.48
RFC3P40938 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RFC3P40938 AC027575.3-201ENST00000583058 2747 ntBASIC5.8□□□□□ -1.48
RFC3P40938 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.8□□□□□ -1.48
RFC3P40938 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RFC3P40938 AC104966.1-201ENST00000467010 1464 ntBASIC5.8□□□□□ -1.48
RFC3P40938 OR2M1P-201ENST00000318104 951 ntBASIC5.8□□□□□ -1.48
RFC3P40938 SNORD16-201ENST00000362803 99 ntBASIC5.8□□□□□ -1.48
RFC3P40938 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.8□□□□□ -1.48
RFC3P40938 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.8□□□□□ -1.48
RFC3P40938 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.8□□□□□ -1.48
RFC3P40938 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.8□□□□□ -1.48
RFC3P40938 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.8□□□□□ -1.48
RFC3P40938 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.8□□□□□ -1.48
RFC3P40938 RPS10P18-201ENST00000442662 495 ntBASIC5.8□□□□□ -1.48
RFC3P40938 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.8□□□□□ -1.48
RFC3P40938 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.8□□□□□ -1.48
RFC3P40938 Z83838.1-202ENST00000456225 839 ntBASIC5.8□□□□□ -1.48
RFC3P40938 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.8□□□□□ -1.48
RFC3P40938 RN7SL369P-201ENST00000477138 299 ntBASIC5.8□□□□□ -1.48
RFC3P40938 RN7SL714P-201ENST00000487050 298 ntBASIC5.8□□□□□ -1.48
RFC3P40938 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.8□□□□□ -1.48
RFC3P40938 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.8□□□□□ -1.48
RFC3P40938 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 AC093524.1-201ENST00000564266 1094 ntBASIC5.8□□□□□ -1.48
RFC3P40938 NDUFA5P11-201ENST00000567995 343 ntBASIC5.8□□□□□ -1.48
RFC3P40938 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.8□□□□□ -1.48
RFC3P40938 SETP3-201ENST00000581726 813 ntBASIC5.8□□□□□ -1.48
RFC3P40938 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.8□□□□□ -1.48
RFC3P40938 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.8□□□□□ -1.48
RFC3P40938 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.8□□□□□ -1.48
RFC3P40938 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RFC3P40938 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RFC3P40938 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
RFC3P40938 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RFC3P40938 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
RFC3P40938 BX284613.1-201ENST00000452221 1641 ntBASIC5.8□□□□□ -1.48
RFC3P40938 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.8□□□□□ -1.48
RFC3P40938 MTND5P12-201ENST00000502851 1449 ntBASIC5.8□□□□□ -1.48
RFC3P40938 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.8□□□□□ -1.48
RFC3P40938 AC006213.6-201ENST00000623722 4179 ntBASIC5.8□□□□□ -1.48
RFC3P40938 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.8□□□□□ -1.48
RFC3P40938 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFC3P40938 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFC3P40938 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.79□□□□□ -1.48
RFC3P40938 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFC3P40938 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RFC3P40938 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFC3P40938 AC137056.2-201ENST00000624055 1958 ntBASIC5.79□□□□□ -1.48
RFC3P40938 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RFC3P40938 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.79□□□□□ -1.48
RFC3P40938 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.79□□□□□ -1.48
RFC3P40938 RPSAP65-201ENST00000429660 595 ntBASIC5.79□□□□□ -1.48
RFC3P40938 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.79□□□□□ -1.48
RFC3P40938 AL451136.1-201ENST00000435399 325 ntBASIC5.79□□□□□ -1.48
RFC3P40938 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.79□□□□□ -1.48
RFC3P40938 RPL5P7-201ENST00000444235 813 ntBASIC5.79□□□□□ -1.48
RFC3P40938 AC009963.4-201ENST00000448535 339 ntBASIC5.79□□□□□ -1.48
RFC3P40938 NDUFA5P5-201ENST00000468361 342 ntBASIC5.79□□□□□ -1.48
RFC3P40938 RPL12P24-201ENST00000474907 486 ntBASIC5.79□□□□□ -1.48
RFC3P40938 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.79□□□□□ -1.48
RFC3P40938 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.79□□□□□ -1.48
RFC3P40938 RN7SKP35-201ENST00000517210 151 ntBASIC5.79□□□□□ -1.48
RFC3P40938 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.79□□□□□ -1.48
RFC3P40938 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.79□□□□□ -1.48
RFC3P40938 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.79□□□□□ -1.48
RFC3P40938 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.79□□□□□ -1.48
RFC3P40938 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.79□□□□□ -1.48
RFC3P40938 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.79□□□□□ -1.48
RFC3P40938 AC005726.4-201ENST00000582858 458 ntBASIC5.79□□□□□ -1.48
RFC3P40938 AC090616.1-201ENST00000583895 447 ntBASIC5.79□□□□□ -1.48
RFC3P40938 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.79□□□□□ -1.48
RFC3P40938 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.79□□□□□ -1.48
RFC3P40938 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFC3P40938 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.79□□□□□ -1.48
RFC3P40938 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFC3P40938 AC125238.2-201ENST00000430003 1440 ntBASIC5.79□□□□□ -1.48
RFC3P40938 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFC3P40938 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RFC3P40938 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.79□□□□□ -1.48
RFC3P40938 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RFC3P40938 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.79□□□□□ -1.48
RFC3P40938 TNPO1P2-201ENST00000426249 2665 ntBASIC5.79□□□□□ -1.48
RFC3P40938 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RFC3P40938 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFC3P40938 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RFC3P40938 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFC3P40938 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFC3P40938 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RFC3P40938 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.78□□□□□ -1.48
RFC3P40938 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms