Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.29□□□□□ -1.4
FDFT1P37268 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.29□□□□□ -1.4
FDFT1P37268 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FDFT1P37268 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.29□□□□□ -1.4
FDFT1P37268 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.29□□□□□ -1.4
FDFT1P37268 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FDFT1P37268 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FDFT1P37268 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FDFT1P37268 AC092070.2-203ENST00000598377 3644 ntBASIC6.29□□□□□ -1.4
FDFT1P37268 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.28□□□□□ -1.4
FDFT1P37268 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.28□□□□□ -1.4
FDFT1P37268 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 DNM1P47-203ENST00000571780 12667 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.28□□□□□ -1.4
FDFT1P37268 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.28□□□□□ -1.4
FDFT1P37268 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FDFT1P37268 RNA5SP346-201ENST00000363541 121 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FDFT1P37268 AL096800.1-201ENST00000405326 893 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.28□□□□□ -1.4
FDFT1P37268 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 AL731534.1-201ENST00000434711 269 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 CXCR2P1-202ENST00000443392 1074 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FDFT1P37268 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.28□□□□□ -1.4
FDFT1P37268 HIGD1AP16-201ENST00000450986 258 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 AL133351.3-201ENST00000454998 193 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 RN7SL352P-201ENST00000466002 277 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.28□□□□□ -1.4
FDFT1P37268 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.28□□□□□ -1.4
FDFT1P37268 Y_RNA.710-201ENST00000516975 110 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.28□□□□□ -1.4
FDFT1P37268 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.28□□□□□ -1.4
FDFT1P37268 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.28□□□□□ -1.4
FDFT1P37268 GAPDHP41-201ENST00000613707 975 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.28□□□□□ -1.4
FDFT1P37268 AC069234.4-201ENST00000621276 412 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FDFT1P37268 AL133243.2-201ENST00000610331 1621 ntBASIC6.28□□□□□ -1.4
FDFT1P37268 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
FDFT1P37268 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
FDFT1P37268 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FDFT1P37268 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FDFT1P37268 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
FDFT1P37268 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
FDFT1P37268 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.27□□□□□ -1.41
FDFT1P37268 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.27□□□□□ -1.41
FDFT1P37268 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FDFT1P37268 AC015799.1-201ENST00000622996 3122 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
FDFT1P37268 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FDFT1P37268 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.27□□□□□ -1.41
FDFT1P37268 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
FDFT1P37268 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
FDFT1P37268 SNORD1C-201ENST00000363315 78 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 GNG5P2-201ENST00000372054 207 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.27□□□□□ -1.41
FDFT1P37268 YWHAZP4-201ENST00000392459 708 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 AL157702.1-201ENST00000398764 426 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.27□□□□□ -1.41
FDFT1P37268 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.27□□□□□ -1.41
FDFT1P37268 IGLV3-4-201ENST00000432300 244 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 AL365220.1-201ENST00000432923 399 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 AC094019.1-201ENST00000434678 472 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.27□□□□□ -1.41
FDFT1P37268 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.27□□□□□ -1.41
FDFT1P37268 SNORA74.1-201ENST00000516320 180 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 TPM3P3-201ENST00000521343 354 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FDFT1P37268 NATP-201ENST00000523491 878 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
FDFT1P37268 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FDFT1P37268 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.27□□□□□ -1.41
FDFT1P37268 RNU4ATAC-201ENST00000580972 127 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 MIR132-201ENST00000591554 101 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 AC008555.7-201ENST00000605008 583 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 AL034374.2-201ENST00000605281 548 ntBASIC6.27□□□□□ -1.41
FDFT1P37268 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.27□□□□□ -1.41
FDFT1P37268 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.27□□□□□ -1.41
FDFT1P37268 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms