Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AP001784.1-201ENST00000624107 428 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.23□□□□□ -1.25
SCN4AP35499 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.23□□□□□ -1.25
SCN4AP35499 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SCN4AP35499 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.23□□□□□ -1.25
SCN4AP35499 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.23□□□□□ -1.25
SCN4AP35499 AL592429.1-201ENST00000403909 1473 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 AC138915.4-201ENST00000565549 4147 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.23□□□□□ -1.25
SCN4AP35499 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SCN4AP35499 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCN4AP35499 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.23□□□□□ -1.25
SCN4AP35499 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SCN4AP35499 AC016583.1-201ENST00000624221 2431 ntBASIC7.23□□□□□ -1.25
SCN4AP35499 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
SCN4AP35499 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SCN4AP35499 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.22□□□□□ -1.25
SCN4AP35499 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.22□□□□□ -1.25
SCN4AP35499 SNORA56-201ENST00000383966 129 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AL713922.1-201ENST00000416477 747 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AL022331.1-201ENST00000429025 477 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.22□□□□□ -1.25
SCN4AP35499 RPL12P3-201ENST00000440080 396 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AC108161.1-201ENST00000461060 402 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 RN7SL30P-201ENST00000488416 306 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.22□□□□□ -1.25
SCN4AP35499 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCN4AP35499 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.22□□□□□ -1.25
SCN4AP35499 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.22□□□□□ -1.25
SCN4AP35499 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCN4AP35499 AC013731.1-201ENST00000604340 883 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AL021918.2-201ENST00000613415 194 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 MIR6810-201ENST00000622701 70 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AC005332.9-201ENST00000620266 2921 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.22□□□□□ -1.25
SCN4AP35499 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCN4AP35499 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SCN4AP35499 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.22□□□□□ -1.25
SCN4AP35499 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
SCN4AP35499 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SCN4AP35499 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCN4AP35499 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.22□□□□□ -1.25
SCN4AP35499 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
SCN4AP35499 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.22□□□□□ -1.25
SCN4AP35499 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.22□□□□□ -1.25
SCN4AP35499 RNU105B-201ENST00000364478 208 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AL589647.1-201ENST00000402485 466 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 RN7SL57P-201ENST00000493687 290 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.22□□□□□ -1.25
SCN4AP35499 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.22□□□□□ -1.25
SCN4AP35499 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.22□□□□□ -1.25
SCN4AP35499 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SCN4AP35499 AC005840.5-201ENST00000619166 599 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 MIR8080-201ENST00000622224 89 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 MRRFP1-201ENST00000435941 1675 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 AC104162.1-201ENST00000430831 2382 ntBASIC7.22□□□□□ -1.25
SCN4AP35499 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SCN4AP35499 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.21□□□□□ -1.25
SCN4AP35499 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
SCN4AP35499 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SCN4AP35499 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
SCN4AP35499 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.21□□□□□ -1.25
SCN4AP35499 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.21□□□□□ -1.25
SCN4AP35499 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SCN4AP35499 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SCN4AP35499 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SCN4AP35499 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.21□□□□□ -1.26
SCN4AP35499 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.21□□□□□ -1.26
SCN4AP35499 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SCN4AP35499 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SCN4AP35499 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SCN4AP35499 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.21□□□□□ -1.26
SCN4AP35499 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.21□□□□□ -1.26
SCN4AP35499 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SCN4AP35499 RN7SKP273-201ENST00000411392 314 ntBASIC7.21□□□□□ -1.26
SCN4AP35499 RPL37P18-201ENST00000411602 243 ntBASIC7.21□□□□□ -1.26
SCN4AP35499 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.21□□□□□ -1.26
SCN4AP35499 AURKAPS1-201ENST00000451805 1212 ntBASIC7.21□□□□□ -1.26
SCN4AP35499 AC093166.4-201ENST00000457867 318 ntBASIC7.21□□□□□ -1.26
SCN4AP35499 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.21□□□□□ -1.26
SCN4AP35499 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.21□□□□□ -1.26
SCN4AP35499 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.21□□□□□ -1.26
SCN4AP35499 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.21□□□□□ -1.26
SCN4AP35499 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.21□□□□□ -1.26
SCN4AP35499 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SCN4AP35499 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.21□□□□□ -1.26
SCN4AP35499 RN7SL708P-201ENST00000580952 299 ntBASIC7.21□□□□□ -1.26
SCN4AP35499 AC136428.4-201ENST00000634254 1155 ntBASIC7.21□□□□□ -1.26
SCN4AP35499 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SCN4AP35499 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.21□□□□□ -1.26
SCN4AP35499 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SCN4AP35499 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SCN4AP35499 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.21□□□□□ -1.26
SCN4AP35499 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 315.8 ms