Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.03□□□□□ -1.28
CIITAP33076 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 AC027575.3-201ENST00000583058 2747 ntBASIC7.03□□□□□ -1.28
CIITAP33076 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CIITAP33076 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.03□□□□□ -1.28
CIITAP33076 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 SNORA21-201ENST00000362423 132 ntBASIC7.03□□□□□ -1.28
CIITAP33076 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
CIITAP33076 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.03□□□□□ -1.28
CIITAP33076 OR3D1P-201ENST00000438288 955 ntBASIC7.03□□□□□ -1.28
CIITAP33076 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.03□□□□□ -1.28
CIITAP33076 RN7SL165P-201ENST00000477476 291 ntBASIC7.03□□□□□ -1.28
CIITAP33076 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.03□□□□□ -1.28
CIITAP33076 BCAS2P1-201ENST00000528022 632 ntBASIC7.03□□□□□ -1.28
CIITAP33076 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.03□□□□□ -1.28
CIITAP33076 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.03□□□□□ -1.28
CIITAP33076 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.03□□□□□ -1.28
CIITAP33076 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.03□□□□□ -1.28
CIITAP33076 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.03□□□□□ -1.28
CIITAP33076 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.03□□□□□ -1.28
CIITAP33076 AC011497.2-201ENST00000600255 639 ntBASIC7.03□□□□□ -1.28
CIITAP33076 AC022106.1-201ENST00000612834 766 ntBASIC7.03□□□□□ -1.28
CIITAP33076 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 HDAC1P2-201ENST00000453661 1398 ntBASIC7.03□□□□□ -1.28
CIITAP33076 AC007342.9-201ENST00000623877 1385 ntBASIC7.03□□□□□ -1.28
CIITAP33076 AC119674.1-213ENST00000641177 1386 ntBASIC7.03□□□□□ -1.28
CIITAP33076 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.03□□□□□ -1.28
CIITAP33076 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CIITAP33076 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.03□□□□□ -1.28
CIITAP33076 AC104966.1-201ENST00000467010 1464 ntBASIC7.03□□□□□ -1.28
CIITAP33076 DOCK11P1-201ENST00000553480 5932 ntBASIC7.03□□□□□ -1.28
CIITAP33076 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
CIITAP33076 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.28
CIITAP33076 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.02□□□□□ -1.29
CIITAP33076 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
CIITAP33076 AP001541.1-201ENST00000623322 1904 ntBASIC7.02□□□□□ -1.29
CIITAP33076 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 RNA5SP115-201ENST00000411160 107 ntBASIC7.02□□□□□ -1.29
CIITAP33076 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 AC130360.1-201ENST00000425489 1117 ntBASIC7.02□□□□□ -1.29
CIITAP33076 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.02□□□□□ -1.29
CIITAP33076 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.02□□□□□ -1.29
CIITAP33076 PPIAP7-201ENST00000454070 489 ntBASIC7.02□□□□□ -1.29
CIITAP33076 AC103563.5-201ENST00000455643 364 ntBASIC7.02□□□□□ -1.29
CIITAP33076 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 RN7SL221P-201ENST00000466190 281 ntBASIC7.02□□□□□ -1.29
CIITAP33076 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.02□□□□□ -1.29
CIITAP33076 LDHAP1-201ENST00000509421 992 ntBASIC7.02□□□□□ -1.29
CIITAP33076 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.02□□□□□ -1.29
CIITAP33076 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 RN7SKP70-201ENST00000516655 271 ntBASIC7.02□□□□□ -1.29
CIITAP33076 RNA5SP400-201ENST00000517155 111 ntBASIC7.02□□□□□ -1.29
CIITAP33076 IGKV3D-25-201ENST00000519599 235 ntBASIC7.02□□□□□ -1.29
CIITAP33076 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.02□□□□□ -1.29
CIITAP33076 AC130365.2-201ENST00000525882 1201 ntBASIC7.02□□□□□ -1.29
CIITAP33076 AP000620.1-201ENST00000527147 504 ntBASIC7.02□□□□□ -1.29
CIITAP33076 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.02□□□□□ -1.29
CIITAP33076 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC7.02□□□□□ -1.29
CIITAP33076 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 AL021368.3-201ENST00000607119 578 ntBASIC7.02□□□□□ -1.29
CIITAP33076 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 AC006213.5-201ENST00000619673 288 ntBASIC7.02□□□□□ -1.29
CIITAP33076 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CIITAP33076 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.02□□□□□ -1.29
CIITAP33076 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CIITAP33076 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.02□□□□□ -1.29
CIITAP33076 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.01□□□□□ -1.29
CIITAP33076 AC078880.4-201ENST00000617627 1749 ntBASIC7.01□□□□□ -1.29
CIITAP33076 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CIITAP33076 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms