Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTPN6P29350 AKAP17BP-201ENST00000431706 2719 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTPN6P29350 RNU1-84P-201ENST00000365447 164 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AC245036.1-201ENST00000391727 309 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTPN6P29350 RPL7AP51-201ENST00000422016 760 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 AL157884.1-201ENST00000424561 454 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AL354707.3-201ENST00000427308 331 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.96□□□□□ -1.46
PTPN6P29350 AC234771.2-201ENST00000445718 597 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 OR52E7P-201ENST00000452394 933 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AC098818.1-201ENST00000478593 252 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.96□□□□□ -1.46
PTPN6P29350 OR9A1P-202ENST00000484361 945 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.96□□□□□ -1.46
PTPN6P29350 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.96□□□□□ -1.46
PTPN6P29350 RN7SL649P-201ENST00000496974 275 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.96□□□□□ -1.46
PTPN6P29350 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.96□□□□□ -1.46
PTPN6P29350 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.96□□□□□ -1.46
PTPN6P29350 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 AC138409.2-202ENST00000507274 458 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 SETP21-201ENST00000514799 892 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AC116917.1-201ENST00000520558 305 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.96□□□□□ -1.46
PTPN6P29350 TDGP1-201ENST00000543961 1229 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 RPL3P13-201ENST00000550415 216 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.96□□□□□ -1.46
PTPN6P29350 AC133552.4-201ENST00000576103 676 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 SYPL1P2-201ENST00000582878 727 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.96□□□□□ -1.46
PTPN6P29350 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.96□□□□□ -1.46
PTPN6P29350 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.96□□□□□ -1.46
PTPN6P29350 NDUFB9P1-201ENST00000604683 510 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 AL589743.6-201ENST00000611025 117 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.96□□□□□ -1.46
PTPN6P29350 AC009950.2-201ENST00000636548 183 ntBASIC5.96□□□□□ -1.46
PTPN6P29350 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTPN6P29350 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PTPN6P29350 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.96□□□□□ -1.46
PTPN6P29350 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PTPN6P29350 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.96□□□□□ -1.46
PTPN6P29350 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTPN6P29350 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTPN6P29350 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTPN6P29350 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
PTPN6P29350 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTPN6P29350 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 AP001541.1-201ENST00000623322 1904 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PTPN6P29350 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
PTPN6P29350 AL121768.1-201ENST00000613917 2544 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.95□□□□□ -1.46
PTPN6P29350 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 SNORD16-201ENST00000362803 99 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 MIR433-201ENST00000384837 93 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.95□□□□□ -1.46
PTPN6P29350 SNORA11.5-201ENST00000408163 128 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PTPN6P29350 GAPDHP75-201ENST00000433910 943 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.95□□□□□ -1.46
PTPN6P29350 LINC00328-2P-201ENST00000436585 219 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 BX679664.2-201ENST00000439282 283 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.95□□□□□ -1.46
PTPN6P29350 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.95□□□□□ -1.46
PTPN6P29350 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.95□□□□□ -1.46
PTPN6P29350 AC124891.1-201ENST00000536322 519 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 AC009729.1-201ENST00000548873 1133 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.95□□□□□ -1.46
PTPN6P29350 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.95□□□□□ -1.46
PTPN6P29350 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 AL589863.1-201ENST00000595383 631 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.95□□□□□ -1.46
PTPN6P29350 AL137246.1-201ENST00000607072 977 ntBASIC5.95□□□□□ -1.46
PTPN6P29350 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.95□□□□□ -1.46
PTPN6P29350 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.95□□□□□ -1.46
PTPN6P29350 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PTPN6P29350 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.95□□□□□ -1.46
PTPN6P29350 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTPN6P29350 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PTPN6P29350 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.94□□□□□ -1.46
PTPN6P29350 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PTPN6P29350 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms