Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RXRBP28702 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
RXRBP28702 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
RXRBP28702 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.62□□□□□ -1.03
RXRBP28702 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.62□□□□□ -1.03
RXRBP28702 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC8.62□□□□□ -1.03
RXRBP28702 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.62□□□□□ -1.03
RXRBP28702 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
RXRBP28702 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 AC026464.2-201ENST00000567834 2421 ntBASIC8.61□□□□□ -1.03
RXRBP28702 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
RXRBP28702 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
RXRBP28702 OR4K17-201ENST00000315543 1032 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AC008549.2-201ENST00000333482 706 ntBASIC8.61□□□□□ -1.03
RXRBP28702 SNORA56-201ENST00000383966 129 ntBASIC8.61□□□□□ -1.03
RXRBP28702 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 AL096711.1-201ENST00000404780 554 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 AC245060.4-201ENST00000413293 1121 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.61□□□□□ -1.03
RXRBP28702 AC239367.3-201ENST00000428996 814 ntBASIC8.61□□□□□ -1.03
RXRBP28702 FMO7P-201ENST00000436045 768 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 MTND1P27-201ENST00000451117 902 ntBASIC8.61□□□□□ -1.03
RXRBP28702 NDUFA5P9-201ENST00000472609 340 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.61□□□□□ -1.03
RXRBP28702 AC105420.1-201ENST00000504389 582 ntBASIC8.61□□□□□ -1.03
RXRBP28702 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 NATP-201ENST00000523491 878 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.61□□□□□ -1.03
RXRBP28702 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.61□□□□□ -1.03
RXRBP28702 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC8.61□□□□□ -1.03
RXRBP28702 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 AL358072.1-201ENST00000604156 575 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AC090425.2-201ENST00000608818 501 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AC079395.2-201ENST00000610982 737 ntBASIC8.61□□□□□ -1.03
RXRBP28702 AP003497.2-201ENST00000624220 967 ntBASIC8.61□□□□□ -1.03
RXRBP28702 LGI1-209ENST00000627699 664 ntTSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
RXRBP28702 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC8.61□□□□□ -1.03
RXRBP28702 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.61□□□□□ -1.03
RXRBP28702 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.61□□□□□ -1.03
RXRBP28702 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
RXRBP28702 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.61□□□□□ -1.03
RXRBP28702 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.61□□□□□ -1.03
RXRBP28702 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.6□□□□□ -1.03
RXRBP28702 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 AC008627.1-201ENST00000517511 1704 ntBASIC8.6□□□□□ -1.03
RXRBP28702 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 AL590763.1-201ENST00000398297 1545 ntBASIC8.6□□□□□ -1.03
RXRBP28702 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
RXRBP28702 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.6□□□□□ -1.03
RXRBP28702 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.6□□□□□ -1.03
RXRBP28702 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 RNU6-171P-201ENST00000384354 107 ntBASIC8.6□□□□□ -1.03
RXRBP28702 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC8.6□□□□□ -1.03
RXRBP28702 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
RXRBP28702 AL031779.1-201ENST00000415663 330 ntBASIC8.6□□□□□ -1.03
RXRBP28702 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC8.6□□□□□ -1.03
RXRBP28702 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC8.6□□□□□ -1.03
RXRBP28702 RPL7P34-201ENST00000433316 712 ntBASIC8.6□□□□□ -1.03
RXRBP28702 GSTA7P-201ENST00000438425 448 ntBASIC8.6□□□□□ -1.03
RXRBP28702 SETD6P1-201ENST00000444575 317 ntBASIC8.6□□□□□ -1.03
RXRBP28702 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC8.6□□□□□ -1.03
RXRBP28702 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms