Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HMGA1P17096 AL512422.1-201ENST00000407033 553 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGA1P17096 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGA1P17096 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGA1P17096 AL391987.1-201ENST00000441025 200 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 PPIAP20-201ENST00000449839 135 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 AP006222.1-205ENST00000450734 457 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 AC103563.5-201ENST00000455643 364 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 AOX3P-204ENST00000491025 2107 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 RN7SL101P-201ENST00000496350 279 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 SETP21-201ENST00000514799 892 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 RN7SKP98-201ENST00000517070 156 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 AC110056.1-201ENST00000525759 911 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.33□□□□□ -1.4
HMGA1P17096 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGA1P17096 MIR4776-2-201ENST00000580204 80 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 AP005431.1-201ENST00000618479 319 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGA1P17096 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HMGA1P17096 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.33□□□□□ -1.4
HMGA1P17096 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HMGA1P17096 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
HMGA1P17096 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 AC027088.4-201ENST00000611559 1947 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 RNF19BPY-201ENST00000458209 1550 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGA1P17096 LINC01616-201ENST00000561816 2280 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.32□□□□□ -1.4
HMGA1P17096 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HMGA1P17096 RN7SKP77-201ENST00000363261 353 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 RN7SKP69-201ENST00000365390 305 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.32□□□□□ -1.4
HMGA1P17096 KIF4CP-201ENST00000422742 1279 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 AL512637.1-201ENST00000439523 1231 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.32□□□□□ -1.4
HMGA1P17096 AC023245.1-201ENST00000468501 517 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.32□□□□□ -1.4
HMGA1P17096 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGA1P17096 WBP1LP3-201ENST00000523033 208 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGA1P17096 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGA1P17096 AC091193.1-201ENST00000604640 448 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.32□□□□□ -1.4
HMGA1P17096 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.32□□□□□ -1.4
HMGA1P17096 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.32□□□□□ -1.4
HMGA1P17096 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.32□□□□□ -1.4
HMGA1P17096 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HMGA1P17096 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HMGA1P17096 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGA1P17096 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGA1P17096 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HMGA1P17096 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGA1P17096 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HMGA1P17096 RN7SKP81-201ENST00000365603 331 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 SNORA17A-201ENST00000391185 133 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.31□□□□□ -1.4
HMGA1P17096 RN7SKP206-201ENST00000410823 293 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGA1P17096 BMS1P10-201ENST00000443754 1120 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGA1P17096 RPL31P15-201ENST00000449770 338 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 RPL23AP60-201ENST00000450011 454 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGA1P17096 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 AL122020.1-201ENST00000472287 459 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms