Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SNORA70J-201ENST00000384182 135 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 RNU6-167P-201ENST00000384292 106 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 MIR1275-201ENST00000408770 80 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 RPS17P17-201ENST00000419392 409 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 NME1P1-201ENST00000420914 382 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFRAP16234 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFRAP16234 GAPDHP59-201ENST00000435908 267 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 CXCR2P1-202ENST00000443392 1074 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFRAP16234 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 RPS27AP3-201ENST00000453803 454 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 RN7SL168P-201ENST00000463821 279 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFRAP16234 OR4D12P-201ENST00000509361 911 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFRAP16234 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.56□□□□□ -1.36
PDGFRAP16234 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFRAP16234 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 OR4H6P-201ENST00000563771 921 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AC005632.2-201ENST00000564271 828 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
PDGFRAP16234 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFRAP16234 OR1E3-201ENST00000575608 948 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AC027229.1-201ENST00000583887 253 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFRAP16234 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 MIR6721-201ENST00000617181 87 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFRAP16234 AL683826.1-201ENST00000624104 627 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AC111152.1-202ENST00000635848 339 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 AP003486.1-201ENST00000525716 3994 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
PDGFRAP16234 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 WBP11P1-201ENST00000562560 1931 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PDGFRAP16234 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.56□□□□□ -1.36
PDGFRAP16234 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 AC092724.1-201ENST00000624623 3397 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PDGFRAP16234 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFRAP16234 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PDGFRAP16234 MIR188-201ENST00000385034 86 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 RN7SKP121-201ENST00000410842 305 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 TMA16P2-201ENST00000413187 601 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFRAP16234 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 AC094019.1-201ENST00000434678 472 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 AC016908.1-201ENST00000442571 1219 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.55□□□□□ -1.36
PDGFRAP16234 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 AC118758.1-202ENST00000454719 225 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.55□□□□□ -1.36
PDGFRAP16234 RN7SL104P-201ENST00000498686 293 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFRAP16234 RNA5SP473-201ENST00000516402 125 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 Vault.2-201ENST00000516519 98 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFRAP16234 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.55□□□□□ -1.36
PDGFRAP16234 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.55□□□□□ -1.36
PDGFRAP16234 AC018558.5-201ENST00000565840 952 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 AL078601.3-201ENST00000573303 535 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 NPIPB1P-202ENST00000588786 828 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AL135999.3-201ENST00000610501 812 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AC010998.3-201ENST00000613871 631 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 AC116667.2-201ENST00000641075 823 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
PDGFRAP16234 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PDGFRAP16234 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.55□□□□□ -1.36
PDGFRAP16234 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PDGFRAP16234 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFRAP16234 AC092692.1-201ENST00000623625 2595 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms