Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC10.91□□□□□ -0.66
CHGAP10645 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CHGAP10645 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 RNU4-91P-201ENST00000364778 135 ntBASIC10.91□□□□□ -0.66
CHGAP10645 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC10.91□□□□□ -0.66
CHGAP10645 RNU6-1011P-201ENST00000384668 107 ntBASIC10.91□□□□□ -0.66
CHGAP10645 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CHGAP10645 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC10.91□□□□□ -0.66
CHGAP10645 RPL35P8-201ENST00000433284 337 ntBASIC10.91□□□□□ -0.66
CHGAP10645 AC245452.2-201ENST00000435222 392 ntBASIC10.91□□□□□ -0.66
CHGAP10645 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC10.91□□□□□ -0.66
CHGAP10645 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC10.91□□□□□ -0.66
CHGAP10645 OR13C1P-201ENST00000457612 963 ntBASIC10.91□□□□□ -0.66
CHGAP10645 AC147055.4-201ENST00000504399 745 ntBASIC10.91□□□□□ -0.66
CHGAP10645 ARL2BPP4-201ENST00000506854 471 ntBASIC10.91□□□□□ -0.66
CHGAP10645 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC10.91□□□□□ -0.66
CHGAP10645 RNU6-718P-201ENST00000516166 105 ntBASIC10.91□□□□□ -0.66
CHGAP10645 Y_RNA.702-201ENST00000516843 96 ntBASIC10.91□□□□□ -0.66
CHGAP10645 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC10.91□□□□□ -0.66
CHGAP10645 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC10.91□□□□□ -0.66
CHGAP10645 SMARCE1P4-201ENST00000523647 241 ntBASIC10.91□□□□□ -0.66
CHGAP10645 AP001207.1-201ENST00000524051 481 ntBASIC10.91□□□□□ -0.66
CHGAP10645 AC130366.1-201ENST00000526505 1192 ntBASIC10.91□□□□□ -0.66
CHGAP10645 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC10.91□□□□□ -0.66
CHGAP10645 OR6C7P-201ENST00000547875 934 ntBASIC10.91□□□□□ -0.66
CHGAP10645 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 MIR3912-201ENST00000577566 105 ntBASIC10.91□□□□□ -0.66
CHGAP10645 AP005262.1-201ENST00000582646 997 ntBASIC10.91□□□□□ -0.66
CHGAP10645 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC10.91□□□□□ -0.66
CHGAP10645 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 AC068790.7-201ENST00000602347 528 ntBASIC10.91□□□□□ -0.66
CHGAP10645 AL096855.2-201ENST00000605785 369 ntBASIC10.91□□□□□ -0.66
CHGAP10645 AL121782.1-201ENST00000611242 413 ntBASIC10.91□□□□□ -0.66
CHGAP10645 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 AL138693.1-201ENST00000622219 129 ntBASIC10.91□□□□□ -0.66
CHGAP10645 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC10.91□□□□□ -0.66
CHGAP10645 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CHGAP10645 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CHGAP10645 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC10.91□□□□□ -0.66
CHGAP10645 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
CHGAP10645 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC10.9□□□□□ -0.66
CHGAP10645 AL080317.3-201ENST00000607434 4315 ntBASIC10.9□□□□□ -0.66
CHGAP10645 AL157831.2-201ENST00000564681 3095 ntBASIC10.9□□□□□ -0.66
CHGAP10645 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC10.9□□□□□ -0.66
CHGAP10645 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC10.9□□□□□ -0.66
CHGAP10645 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CHGAP10645 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CHGAP10645 RNU6-253P-201ENST00000384730 105 ntBASIC10.9□□□□□ -0.66
CHGAP10645 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
CHGAP10645 RPL23AP59-201ENST00000399415 461 ntBASIC10.9□□□□□ -0.66
CHGAP10645 AC027644.1-201ENST00000419595 298 ntBASIC10.9□□□□□ -0.66
CHGAP10645 CYCSP46-201ENST00000423569 204 ntBASIC10.9□□□□□ -0.66
CHGAP10645 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC10.9□□□□□ -0.66
CHGAP10645 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC10.9□□□□□ -0.66
CHGAP10645 AC027124.1-201ENST00000440852 466 ntBASIC10.9□□□□□ -0.66
CHGAP10645 TRIM60P18-201ENST00000441518 828 ntBASIC10.9□□□□□ -0.66
CHGAP10645 RPL36AP33-201ENST00000450395 310 ntBASIC10.9□□□□□ -0.66
CHGAP10645 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC10.9□□□□□ -0.66
CHGAP10645 PPIA-203ENST00000451562 544 ntTSL 2 BASIC10.9□□□□□ -0.66
CHGAP10645 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC10.9□□□□□ -0.66
CHGAP10645 AC010587.2-201ENST00000511727 448 ntBASIC10.9□□□□□ -0.66
CHGAP10645 IGHVII-51-2-201ENST00000519778 259 ntBASIC10.9□□□□□ -0.66
CHGAP10645 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC10.9□□□□□ -0.66
CHGAP10645 AC013701.1-201ENST00000522657 465 ntBASIC10.9□□□□□ -0.66
CHGAP10645 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC10.9□□□□□ -0.66
CHGAP10645 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC10.9□□□□□ -0.66
CHGAP10645 COX4I1P1-201ENST00000554239 509 ntBASIC10.9□□□□□ -0.66
CHGAP10645 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC10.9□□□□□ -0.66
CHGAP10645 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC10.9□□□□□ -0.66
CHGAP10645 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC10.9□□□□□ -0.66
CHGAP10645 AC016629.2-201ENST00000597341 199 ntBASIC10.9□□□□□ -0.66
CHGAP10645 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC10.9□□□□□ -0.66
CHGAP10645 IMMP1LP1-201ENST00000605170 488 ntBASIC10.9□□□□□ -0.66
CHGAP10645 U47924.1-201ENST00000606539 434 ntBASIC10.9□□□□□ -0.66
CHGAP10645 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC10.9□□□□□ -0.66
CHGAP10645 AC026951.2-201ENST00000613847 241 ntBASIC10.9□□□□□ -0.66
CHGAP10645 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CHGAP10645 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms