Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OR1N1-202ENST00000619659 939 ntBASIC6.74□□□□□ -1.33
RB1P06400 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.74□□□□□ -1.33
RB1P06400 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 AC073488.3-201ENST00000631611 778 ntBASIC6.74□□□□□ -1.33
RB1P06400 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.74□□□□□ -1.33
RB1P06400 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
RB1P06400 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
RB1P06400 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
RB1P06400 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
RB1P06400 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.73□□□□□ -1.33
RB1P06400 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
RB1P06400 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.73□□□□□ -1.33
RB1P06400 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 RNA5SP242-201ENST00000364171 118 ntBASIC6.73□□□□□ -1.33
RB1P06400 MIR143-201ENST00000385300 106 ntBASIC6.73□□□□□ -1.33
RB1P06400 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.73□□□□□ -1.33
RB1P06400 SDHDP6-201ENST00000414693 480 ntBASIC6.73□□□□□ -1.33
RB1P06400 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.73□□□□□ -1.33
RB1P06400 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.73□□□□□ -1.33
RB1P06400 GAPDHP48-201ENST00000436626 961 ntBASIC6.73□□□□□ -1.33
RB1P06400 HMGN1P36-201ENST00000446623 298 ntBASIC6.73□□□□□ -1.33
RB1P06400 AC005077.1-201ENST00000449226 375 ntBASIC6.73□□□□□ -1.33
RB1P06400 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.73□□□□□ -1.33
RB1P06400 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.73□□□□□ -1.33
RB1P06400 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 AC106800.3-201ENST00000511389 308 ntBASIC6.73□□□□□ -1.33
RB1P06400 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.73□□□□□ -1.33
RB1P06400 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.73□□□□□ -1.33
RB1P06400 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.73□□□□□ -1.33
RB1P06400 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.73□□□□□ -1.33
RB1P06400 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.73□□□□□ -1.33
RB1P06400 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 AC007225.2-201ENST00000562529 256 ntBASIC6.73□□□□□ -1.33
RB1P06400 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.73□□□□□ -1.33
RB1P06400 MIR3176-201ENST00000582210 90 ntBASIC6.73□□□□□ -1.33
RB1P06400 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.73□□□□□ -1.33
RB1P06400 AL049840.6-201ENST00000604583 345 ntBASIC6.73□□□□□ -1.33
RB1P06400 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 MIR6826-201ENST00000617808 98 ntBASIC6.73□□□□□ -1.33
RB1P06400 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.73□□□□□ -1.33
RB1P06400 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.73□□□□□ -1.33
RB1P06400 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.73□□□□□ -1.33
RB1P06400 AC008627.1-201ENST00000517511 1704 ntBASIC6.73□□□□□ -1.33
RB1P06400 AC015689.2-201ENST00000528172 1738 ntBASIC6.73□□□□□ -1.33
RB1P06400 AC006600.2-201ENST00000624834 2506 ntBASIC6.73□□□□□ -1.33
RB1P06400 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RB1P06400 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.72□□□□□ -1.33
RB1P06400 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.72□□□□□ -1.33
RB1P06400 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
RB1P06400 AC062022.1-201ENST00000451026 1684 ntBASIC6.72□□□□□ -1.33
RB1P06400 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RB1P06400 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.72□□□□□ -1.33
RB1P06400 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.72□□□□□ -1.33
RB1P06400 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RB1P06400 RN7SKP293-201ENST00000411389 296 ntBASIC6.72□□□□□ -1.33
RB1P06400 AC245096.1-201ENST00000413104 546 ntBASIC6.72□□□□□ -1.33
RB1P06400 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RB1P06400 AL035660.1-201ENST00000422041 222 ntBASIC6.72□□□□□ -1.33
RB1P06400 RPS7P14-201ENST00000426405 583 ntBASIC6.72□□□□□ -1.33
RB1P06400 AL121776.1-201ENST00000429337 372 ntBASIC6.72□□□□□ -1.33
RB1P06400 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms