Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 MTCO1P46-201ENST00000451639 1491 ntBASIC6.39□□□□□ -1.39
PDGFBP01127 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
PDGFBP01127 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.39□□□□□ -1.39
PDGFBP01127 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PDGFBP01127 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDGFBP01127 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
PDGFBP01127 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.39□□□□□ -1.39
PDGFBP01127 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFBP01127 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDGFBP01127 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.38□□□□□ -1.39
PDGFBP01127 SPATA31C1-201ENST00000420021 3895 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 TET1P1-201ENST00000426627 2301 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PDGFBP01127 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFBP01127 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
PDGFBP01127 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFBP01127 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDGFBP01127 RNU4-34P-201ENST00000410431 124 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFBP01127 BX284632.2-201ENST00000421091 399 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFBP01127 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFBP01127 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFBP01127 AL512605.1-202ENST00000441919 381 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 AL512593.1-201ENST00000444758 779 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDGFBP01127 AL359955.2-201ENST00000445380 353 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 MORF4L1P4-201ENST00000450245 976 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 RN7SL834P-201ENST00000461450 286 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 PFN1P6-201ENST00000476786 399 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 RN7SL326P-201ENST00000477493 296 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFBP01127 AC010333.3-201ENST00000615100 402 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PDGFBP01127 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFBP01127 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.38□□□□□ -1.39
PDGFBP01127 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFBP01127 MTCO1P25-201ENST00000414449 1799 ntBASIC6.38□□□□□ -1.39
PDGFBP01127 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFBP01127 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFBP01127 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFBP01127 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFBP01127 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFBP01127 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.37□□□□□ -1.39
PDGFBP01127 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PDGFBP01127 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PDGFBP01127 AL034417.4-202ENST00000642135 2236 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 AC117409.1-201ENST00000470499 1310 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 AC245096.1-201ENST00000413104 546 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 NPM1P4-201ENST00000414095 812 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 AC093155.2-201ENST00000420734 937 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 RPS27P18-201ENST00000431701 247 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFBP01127 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFBP01127 UBA52P7-201ENST00000486088 380 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 RN7SL466P-201ENST00000497546 295 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 AC231760.1-201ENST00000498002 260 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFBP01127 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFBP01127 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFBP01127 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFBP01127 AC016144.1-201ENST00000548175 1087 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFBP01127 COX6CP7-201ENST00000597056 208 ntBASIC6.37□□□□□ -1.39
PDGFBP01127 AL157899.1-201ENST00000604110 936 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms