Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SHOX2O60902 RN7SKP268-201ENST00000411107 316 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHOX2O60902 AC027124.1-201ENST00000440852 466 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SHOX2O60902 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.14□□□□□ -1.43
SHOX2O60902 ST13P21-201ENST00000453250 1098 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 RANP2-201ENST00000456833 229 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.14□□□□□ -1.43
SHOX2O60902 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.14□□□□□ -1.43
SHOX2O60902 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.14□□□□□ -1.43
SHOX2O60902 RN7SL776P-201ENST00000493390 268 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.14□□□□□ -1.43
SHOX2O60902 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.14□□□□□ -1.43
SHOX2O60902 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.14□□□□□ -1.43
SHOX2O60902 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.14□□□□□ -1.43
SHOX2O60902 MIR4800-201ENST00000537353 80 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.14□□□□□ -1.43
SHOX2O60902 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.14□□□□□ -1.43
SHOX2O60902 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHOX2O60902 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.14□□□□□ -1.43
SHOX2O60902 AL589863.1-201ENST00000595383 631 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.14□□□□□ -1.43
SHOX2O60902 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.14□□□□□ -1.43
SHOX2O60902 AC019257.2-201ENST00000605539 497 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 PCA3_2.1-201ENST00000612507 409 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 AL157762.1-201ENST00000619612 415 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 MIR7159-201ENST00000620587 66 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 AL137067.2-201ENST00000621202 131 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 AC027506.1-201ENST00000621395 198 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 AL138693.1-201ENST00000622219 129 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 AP000550.3-201ENST00000637734 379 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHOX2O60902 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHOX2O60902 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SHOX2O60902 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHOX2O60902 AL353743.3-201ENST00000442109 1468 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SHOX2O60902 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
SHOX2O60902 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.13□□□□□ -1.43
SHOX2O60902 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
SHOX2O60902 LDHAP5-201ENST00000394996 622 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AL117344.1-201ENST00000407196 616 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.13□□□□□ -1.43
SHOX2O60902 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.13□□□□□ -1.43
SHOX2O60902 GRPEL2P2-201ENST00000421856 670 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AL596268.1-201ENST00000427910 1048 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.13□□□□□ -1.43
SHOX2O60902 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.13□□□□□ -1.43
SHOX2O60902 CUBNP2-201ENST00000443534 1139 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHOX2O60902 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.13□□□□□ -1.43
SHOX2O60902 RN7SL390P-201ENST00000470634 284 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AC124945.1-201ENST00000485133 188 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.13□□□□□ -1.43
SHOX2O60902 AC073648.3-201ENST00000504939 925 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.13□□□□□ -1.43
SHOX2O60902 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHOX2O60902 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.13□□□□□ -1.43
SHOX2O60902 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHOX2O60902 AC009729.1-201ENST00000548873 1133 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AC084824.2-201ENST00000548906 345 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.13□□□□□ -1.43
SHOX2O60902 AC069240.2-201ENST00000550242 609 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 LSM3P2-201ENST00000551246 273 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.13□□□□□ -1.43
SHOX2O60902 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHOX2O60902 BMS1P16-201ENST00000556075 1147 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AP006587.6-201ENST00000582128 1091 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.13□□□□□ -1.43
SHOX2O60902 EXOSC3P2-201ENST00000594464 497 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AC018809.2-201ENST00000602436 3823 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AL008582.1-201ENST00000609612 442 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 AC008833.1-201ENST00000611633 691 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SHOX2O60902 OR7A1P-202ENST00000641542 1158 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.13□□□□□ -1.43
SHOX2O60902 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHOX2O60902 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SHOX2O60902 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
SHOX2O60902 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SHOX2O60902 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHOX2O60902 LINC02019-201ENST00000608605 2060 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHOX2O60902 AC023632.6-201ENST00000624338 2177 ntBASIC6.13□□□□□ -1.43
SHOX2O60902 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
SHOX2O60902 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 RNU12-2P-201ENST00000364789 156 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHOX2O60902 AL358178.1-201ENST00000407698 397 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 RPL12P10-201ENST00000413498 498 ntBASIC6.12□□□□□ -1.43
SHOX2O60902 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.12□□□□□ -1.43
SHOX2O60902 AL121878.1-201ENST00000418638 859 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms