Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.9□□□□□ -1.62
SSSCA1O60232 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSSCA1O60232 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
SSSCA1O60232 OR7A2P-201ENST00000304105 930 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSSCA1O60232 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SSSCA1O60232 AC226101.1-201ENST00000401483 387 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSSCA1O60232 RN7SKP221-201ENST00000410420 301 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 RN7SKP166-201ENST00000410812 305 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.9□□□□□ -1.63
SSSCA1O60232 AC099670.2-201ENST00000435130 321 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.9□□□□□ -1.63
SSSCA1O60232 CR391992.1-201ENST00000438601 394 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSSCA1O60232 AL139135.2-201ENST00000445040 433 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 AC022080.2-201ENST00000452932 533 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.9□□□□□ -1.63
SSSCA1O60232 AKR1D1P1-201ENST00000457236 936 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 RN7SKP198-201ENST00000459286 306 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 RPL5P15-201ENST00000475870 897 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 RN7SL70P-201ENST00000478322 302 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.9□□□□□ -1.63
SSSCA1O60232 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.9□□□□□ -1.63
SSSCA1O60232 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SSSCA1O60232 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.9□□□□□ -1.63
SSSCA1O60232 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.9□□□□□ -1.63
SSSCA1O60232 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.9□□□□□ -1.63
SSSCA1O60232 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSSCA1O60232 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.9□□□□□ -1.63
SSSCA1O60232 RN7SL426P-201ENST00000579106 295 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC4.9□□□□□ -1.63
SSSCA1O60232 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.9□□□□□ -1.63
SSSCA1O60232 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.9□□□□□ -1.63
SSSCA1O60232 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 OR5G5P-204ENST00000627642 621 ntBASIC4.9□□□□□ -1.63
SSSCA1O60232 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.9□□□□□ -1.63
SSSCA1O60232 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.9□□□□□ -1.63
SSSCA1O60232 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
SSSCA1O60232 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSSCA1O60232 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SSSCA1O60232 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SSSCA1O60232 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.9□□□□□ -1.63
SSSCA1O60232 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.9□□□□□ -1.63
SSSCA1O60232 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSSCA1O60232 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSSCA1O60232 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.89□□□□□ -1.63
SSSCA1O60232 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.89□□□□□ -1.63
SSSCA1O60232 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSSCA1O60232 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC4.89□□□□□ -1.63
SSSCA1O60232 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 AC079248.1-201ENST00000427568 1546 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 THAP12P9-201ENST00000503971 2360 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 RNU1-49P-201ENST00000363468 159 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSSCA1O60232 AC019178.1-201ENST00000392337 440 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 RN7SKP121-201ENST00000410842 305 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 AC245096.1-201ENST00000413104 546 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AC009506.2-201ENST00000420635 840 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AL354766.1-201ENST00000423396 542 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.89□□□□□ -1.63
SSSCA1O60232 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.89□□□□□ -1.63
SSSCA1O60232 FECHP1-201ENST00000431896 1214 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AK3P5-201ENST00000432033 519 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.89□□□□□ -1.63
SSSCA1O60232 AL353803.3-201ENST00000444641 335 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.89□□□□□ -1.63
SSSCA1O60232 RSU1P1-201ENST00000453416 441 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 RN7SL643P-201ENST00000471845 291 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 RPS3AP49-201ENST00000472161 790 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 RN7SL326P-201ENST00000477493 296 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 CR383656.1-201ENST00000484916 377 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AF305872.1-201ENST00000485217 471 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC4.89□□□□□ -1.63
SSSCA1O60232 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 SNX18P24-201ENST00000505249 671 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 RPL7L1P7-201ENST00000509986 724 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 AC090958.1-201ENST00000511122 351 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.89□□□□□ -1.63
SSSCA1O60232 Y_RNA.710-201ENST00000516975 110 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms