Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 BIN2P1-201ENST00000504996 1530 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.36□□□□□ -1.39
SMAD6O43541 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 RNA5SP350-201ENST00000363298 111 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SMAD6O43541 OR7E156P-201ENST00000400303 464 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.36□□□□□ -1.39
SMAD6O43541 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
SMAD6O43541 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.36□□□□□ -1.39
SMAD6O43541 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.36□□□□□ -1.39
SMAD6O43541 PCNPP2-201ENST00000441651 455 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 MORF4-201ENST00000447135 971 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 AC010343.2-201ENST00000510162 224 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 RNA5SP116-201ENST00000516132 98 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 RN7SKP35-201ENST00000517210 151 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 AC009879.1-201ENST00000520029 839 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 AP001858.2-201ENST00000536213 601 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.36□□□□□ -1.39
SMAD6O43541 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.36□□□□□ -1.39
SMAD6O43541 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.36□□□□□ -1.39
SMAD6O43541 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.36□□□□□ -1.39
SMAD6O43541 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 HMGN2P47-201ENST00000559378 272 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 AC002519.2-203ENST00000567043 837 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 AC233702.7-202ENST00000582941 211 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 AL583832.1-201ENST00000603227 784 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 AC091167.5-201ENST00000605689 894 ntBASIC6.36□□□□□ -1.39
SMAD6O43541 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SMAD6O43541 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.36□□□□□ -1.39
SMAD6O43541 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.36□□□□□ -1.39
SMAD6O43541 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SMAD6O43541 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SMAD6O43541 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMAD6O43541 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SMAD6O43541 AC027575.3-201ENST00000583058 2747 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 AC104966.1-201ENST00000467010 1464 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 CAP1P2-201ENST00000417455 1409 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 MAPK10-261ENST00000641050 3109 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 AC007342.9-201ENST00000623877 1385 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SMAD6O43541 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SMAD6O43541 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 RNU1-49P-201ENST00000363468 159 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SMAD6O43541 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 AL445238.1-204ENST00000400311 463 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.35□□□□□ -1.39
SMAD6O43541 RANP7-201ENST00000418085 644 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 PSMD10P2-201ENST00000432890 672 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 AC009237.1-201ENST00000442127 744 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.35□□□□□ -1.39
SMAD6O43541 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SMAD6O43541 AP002884.1-201ENST00000479691 655 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.35□□□□□ -1.39
SMAD6O43541 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 MTND6P8-201ENST00000503471 522 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.35□□□□□ -1.39
SMAD6O43541 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.35□□□□□ -1.39
SMAD6O43541 Y_RNA.710-201ENST00000516975 110 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.35□□□□□ -1.39
SMAD6O43541 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.35□□□□□ -1.39
SMAD6O43541 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.35□□□□□ -1.39
SMAD6O43541 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.35□□□□□ -1.39
SMAD6O43541 AC024933.1-201ENST00000608472 348 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.35□□□□□ -1.39
SMAD6O43541 AC006924.1-201ENST00000610750 559 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 MIR6071-201ENST00000616741 78 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.35□□□□□ -1.39
SMAD6O43541 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.35□□□□□ -1.39
SMAD6O43541 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.35□□□□□ -1.39
SMAD6O43541 AC012078.1-201ENST00000405035 1646 ntBASIC6.35□□□□□ -1.39
SMAD6O43541 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.35□□□□□ -1.39
SMAD6O43541 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms