Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.55□□□□□ -1.36
MSI1O43347 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 AL451136.1-201ENST00000435399 325 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.55□□□□□ -1.36
MSI1O43347 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.55□□□□□ -1.36
MSI1O43347 TPRKBP1-201ENST00000456243 481 ntBASIC6.55□□□□□ -1.36
MSI1O43347 RPL12P30-201ENST00000488389 499 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AP001960.1-201ENST00000506494 658 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AC113398.2-201ENST00000507630 558 ntBASIC6.55□□□□□ -1.36
MSI1O43347 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.55□□□□□ -1.36
MSI1O43347 SNORD116-30-201ENST00000516468 85 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.55□□□□□ -1.36
MSI1O43347 AC006518.1-201ENST00000541449 943 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AC107958.1-201ENST00000556576 290 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.55□□□□□ -1.36
MSI1O43347 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.55□□□□□ -1.36
MSI1O43347 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.55□□□□□ -1.36
MSI1O43347 MIR4502-201ENST00000580432 81 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AP000919.1-201ENST00000582850 985 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.55□□□□□ -1.36
MSI1O43347 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.55□□□□□ -1.36
MSI1O43347 AC022106.1-201ENST00000612834 766 ntBASIC6.55□□□□□ -1.36
MSI1O43347 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.55□□□□□ -1.36
MSI1O43347 AL591926.1-201ENST00000620542 217 ntBASIC6.55□□□□□ -1.36
MSI1O43347 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.55□□□□□ -1.36
MSI1O43347 AL357140.4-201ENST00000636827 412 ntBASIC6.55□□□□□ -1.36
MSI1O43347 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 MAPK10-287ENST00000641217 3037 ntBASIC6.55□□□□□ -1.36
MSI1O43347 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.55□□□□□ -1.36
MSI1O43347 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
MSI1O43347 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.55□□□□□ -1.36
MSI1O43347 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
MSI1O43347 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 OFD1P17-201ENST00000437639 3018 ntBASIC6.55□□□□□ -1.36
MSI1O43347 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
MSI1O43347 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSI1O43347 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.54□□□□□ -1.36
MSI1O43347 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 EIF3EP1-201ENST00000433978 1316 ntBASIC6.54□□□□□ -1.36
MSI1O43347 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
MSI1O43347 AL662795.2-201ENST00000624252 3706 ntBASIC6.54□□□□□ -1.36
MSI1O43347 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.54□□□□□ -1.36
MSI1O43347 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
MSI1O43347 AL161901.1-201ENST00000624954 3425 ntBASIC6.54□□□□□ -1.36
MSI1O43347 RNA5SP333-201ENST00000363466 118 ntBASIC6.54□□□□□ -1.36
MSI1O43347 RNA5SP478-201ENST00000364657 115 ntBASIC6.54□□□□□ -1.36
MSI1O43347 RNA5SP334-201ENST00000364825 118 ntBASIC6.54□□□□□ -1.36
MSI1O43347 SNORA11.3-201ENST00000408471 128 ntBASIC6.54□□□□□ -1.36
MSI1O43347 RNA5SP431-201ENST00000410312 120 ntBASIC6.54□□□□□ -1.36
MSI1O43347 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.54□□□□□ -1.36
MSI1O43347 UBE2V1P14-201ENST00000415815 558 ntBASIC6.54□□□□□ -1.36
MSI1O43347 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.54□□□□□ -1.36
MSI1O43347 MTATP6P11-201ENST00000428071 670 ntBASIC6.54□□□□□ -1.36
MSI1O43347 RPSAP65-201ENST00000429660 595 ntBASIC6.54□□□□□ -1.36
MSI1O43347 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.54□□□□□ -1.36
MSI1O43347 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.54□□□□□ -1.36
MSI1O43347 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.54□□□□□ -1.36
MSI1O43347 AL513343.1-201ENST00000451818 792 ntBASIC6.54□□□□□ -1.36
MSI1O43347 SNX18P26-201ENST00000458433 740 ntBASIC6.54□□□□□ -1.36
MSI1O43347 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.54□□□□□ -1.36
MSI1O43347 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.54□□□□□ -1.36
MSI1O43347 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.54□□□□□ -1.36
MSI1O43347 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 AC023389.2-201ENST00000580031 955 ntBASIC6.54□□□□□ -1.36
MSI1O43347 AP005136.2-201ENST00000583253 1049 ntBASIC6.54□□□□□ -1.36
MSI1O43347 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.54□□□□□ -1.36
MSI1O43347 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.54□□□□□ -1.36
MSI1O43347 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.54□□□□□ -1.36
MSI1O43347 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.54□□□□□ -1.36
MSI1O43347 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
MSI1O43347 MIR7109-201ENST00000613748 65 ntBASIC6.54□□□□□ -1.36
MSI1O43347 SNORA11.6-201ENST00000619030 128 ntBASIC6.54□□□□□ -1.36
MSI1O43347 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.54□□□□□ -1.36
MSI1O43347 CASC19-274ENST00000642018 970 ntBASIC6.54□□□□□ -1.36
MSI1O43347 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.54□□□□□ -1.36
MSI1O43347 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
MSI1O43347 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.54□□□□□ -1.36
MSI1O43347 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
MSI1O43347 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MSI1O43347 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.53□□□□□ -1.36
MSI1O43347 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSI1O43347 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MSI1O43347 TTC41P-205ENST00000551270 3963 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms