Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01109-201ENST00000603837 3081 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 TAC1-203ENST00000350485 975 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL672167.2-201ENST00000377164 879 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 SNORD15A-201ENST00000384214 148 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL136100.1-201ENST00000407696 330 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 OR13D3P-201ENST00000412501 937 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 Z68694.1-201ENST00000413929 841 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 MARK2P12-201ENST00000420129 585 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 IMP3P1-201ENST00000427532 557 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL645937.3-201ENST00000453647 936 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 NMNAT1P3-201ENST00000457517 888 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC022795.1-201ENST00000473808 480 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC021106.2-201ENST00000505310 710 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC138409.2-202ENST00000507274 458 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC026774.2-201ENST00000513990 1098 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 PVT1-214ENST00000522875 922 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 NPIPB14P-203ENST00000532298 987 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 C6orf229-201ENST00000565469 814 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 SLC25A6P5-202ENST00000602729 1038 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL137190.1-201ENST00000603288 282 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC018737.1-201ENST00000603900 204 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AP006545.2-201ENST00000607091 461 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC116165.3-201ENST00000614524 400 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 AC245028.3-201ENST00000618197 285 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 ADAM5-202ENST00000399789 1942 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 TRIM51GP-201ENST00000534741 1350 ntBASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHKB-CPT1BH3BT56 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC104964.3-201ENST00000606115 2860 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms