Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC074141.1-201ENST00000588129 2995 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 CYCSP1-201ENST00000604815 315 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC025262.3-201ENST00000623666 360 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC009950.2-201ENST00000636548 183 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 AP000432.2-201ENST00000624164 2048 ntBASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPIPA2E9PIF3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC010624.4-201ENST00000597606 1351 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 GTF2IP4-201ENST00000453092 2054 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 CDY10P-201ENST00000452415 1567 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 RN7SKP281-201ENST00000410472 352 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC092865.3-201ENST00000425390 1026 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC069154.1-201ENST00000432914 542 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 RPS10P18-201ENST00000442662 495 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 SNX18P25-201ENST00000510539 758 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AP004607.6-201ENST00000525033 1202 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 MIR4301-201ENST00000577203 66 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 MIR4310-201ENST00000582950 57 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AL161912.3-201ENST00000605404 628 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 AC062029.1-202ENST00000606164 3651 ntBASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NPIPA2E9PIF3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 PABPC1P8-201ENST00000452851 2086 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 RPL23AP85-201ENST00000421838 433 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 OR5W1P-201ENST00000423705 938 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AC007679.3-201ENST00000434035 414 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 EMC3-AS1-205ENST00000438698 534 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AL645936.1-201ENST00000441979 518 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 VN1R38P-201ENST00000450265 887 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 RPL23AP64-201ENST00000469465 435 ntBASIC5.8□□□□□ -1.48
NPIPA2E9PIF3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms