Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC024587.1-201ENST00000505925 2157 ntBASIC7.6□□□□□ -1.19
RGPD3A6NKT7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 RNA5SP131-201ENST00000365452 119 ntBASIC7.6□□□□□ -1.19
RGPD3A6NKT7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 RPS11P7-201ENST00000442125 465 ntBASIC7.6□□□□□ -1.19
RGPD3A6NKT7 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 SNORA58-201ENST00000505219 137 ntBASIC7.6□□□□□ -1.19
RGPD3A6NKT7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 MIR4330-201ENST00000579077 105 ntBASIC7.6□□□□□ -1.19
RGPD3A6NKT7 AC027348.2-201ENST00000624375 642 ntBASIC7.6□□□□□ -1.19
RGPD3A6NKT7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 AC114786.1-201ENST00000512892 1415 ntBASIC7.6□□□□□ -1.19
RGPD3A6NKT7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RGPD3A6NKT7 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 SLC35E1P1-201ENST00000419313 864 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 CYCSP6-201ENST00000434498 302 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 RPS29P22-201ENST00000472363 168 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 AC110775.1-201ENST00000513721 462 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 RNA5SP400-201ENST00000517155 111 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 MIR378J-201ENST00000611988 109 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 AC018765.1-201ENST00000623357 3446 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 FO393409.1-201ENST00000399325 1372 ntBASIC7.59□□□□□ -1.19
RGPD3A6NKT7 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.59□□□□□ -1.19
RGPD3A6NKT7 RNU11-6P-201ENST00000391127 133 ntBASIC7.59□□□□□ -1.2
RGPD3A6NKT7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.59□□□□□ -1.2
RGPD3A6NKT7 AC108075.1-201ENST00000424692 529 ntBASIC7.59□□□□□ -1.2
RGPD3A6NKT7 GSTA7P-201ENST00000438425 448 ntBASIC7.59□□□□□ -1.2
RGPD3A6NKT7 RPS7P3-201ENST00000443360 580 ntBASIC7.59□□□□□ -1.2
RGPD3A6NKT7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
RGPD3A6NKT7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.59□□□□□ -1.2
RGPD3A6NKT7 RPL7P6-201ENST00000480903 738 ntBASIC7.59□□□□□ -1.2
RGPD3A6NKT7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.59□□□□□ -1.2
RGPD3A6NKT7 OR56A7P-201ENST00000524865 941 ntBASIC7.59□□□□□ -1.2
RGPD3A6NKT7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.59□□□□□ -1.2
RGPD3A6NKT7 AC119403.2-201ENST00000590960 598 ntBASIC7.59□□□□□ -1.2
RGPD3A6NKT7 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.59□□□□□ -1.2
RGPD3A6NKT7 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
RGPD3A6NKT7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 GUCY1B2-204ENST00000531898 1979 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 MFSD8-217ENST00000641178 4374 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RGPD3A6NKT7 RNA5SP87-201ENST00000384155 118 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 MIR433-201ENST00000384837 93 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 SNRPEP6-201ENST00000407465 277 ntBASIC7.58□□□□□ -1.2
RGPD3A6NKT7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms