Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC021269.1-201ENST00000526860 705 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AP001858.2-201ENST00000536213 601 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC011270.1-201ENST00000558606 583 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC036176.3-201ENST00000602456 418 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC092474.3-201ENST00000603022 568 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AC015802.5-201ENST00000607478 399 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 U1.25-201ENST00000614085 162 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 U1.34-201ENST00000618578 162 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 U1.31-201ENST00000620022 160 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AL137067.2-201ENST00000621202 131 ntBASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TCRBV7S3A2A0A539 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC010168.2-201ENST00000562691 5428 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC016027.5-201ENST00000427227 210 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 OR6R1P-201ENST00000431838 940 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC128677.1-201ENST00000436016 442 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC114728.1-201ENST00000488289 483 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC015524.1-201ENST00000491585 472 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC008429.4-201ENST00000521201 182 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 OR6M2P-201ENST00000529831 871 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC024267.2-201ENST00000582737 417 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AL589765.6-201ENST00000601909 549 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC117490.2-201ENST00000610042 594 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC007204.1-201ENST00000621794 555 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 MIR6503-201ENST00000622884 86 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 AC024587.1-201ENST00000505925 2157 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 SMG1P5-202ENST00000529428 4219 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 SMG1P2-201ENST00000566127 4221 ntBASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TCRBV7S3A2A0A539 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.3□□□□□ -1.4
TCRBV7S3A2A0A539 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms