Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHB1Q9Y5F3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF806-201ENST00000438300 1774 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 MROH3P-201ENST00000435735 2676 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 OR4K17-201ENST00000315543 1032 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 RNA5SP85-201ENST00000365378 119 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC019178.1-201ENST00000392337 440 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 FDPSP5-201ENST00000399474 1057 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC092570.3-201ENST00000420113 693 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC011242.1-201ENST00000433596 1158 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 PMS2P9-201ENST00000441237 515 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 RPL23AP28-201ENST00000448062 470 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 RAB28P3-201ENST00000448325 597 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 HMGN1P5-201ENST00000448591 263 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC104629.2-201ENST00000468627 598 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 RN7SL561P-201ENST00000488553 281 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC096754.1-201ENST00000508904 818 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC034244.2-201ENST00000514668 858 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC092868.3-201ENST00000560515 784 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC015849.2-201ENST00000605738 409 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC112503.2-201ENST00000609005 552 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC005514.1-201ENST00000623521 208 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AP000577.1-201ENST00000624366 878 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 SALL4P7-201ENST00000555779 3120 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 AC010132.4-201ENST00000569883 1368 ntBASIC6.69□□□□□ -1.34
PCDHB1Q9Y5F3 RACGAP1P-201ENST00000550663 1879 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC068733.2-201ENST00000605434 1418 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC007485.2-201ENST00000623493 1667 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AL596244.1-201ENST00000567068 3779 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC017002.4-201ENST00000604721 1525 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 SNORD35A-201ENST00000363389 86 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 RNU6-1000P-201ENST00000391066 106 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AL590128.1-201ENST00000433407 286 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC144530.1-201ENST00000452862 555 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC104849.1-201ENST00000462623 405 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC135999.1-201ENST00000478962 479 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 PFN1P8-201ENST00000497012 543 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AK4P6-201ENST00000505168 528 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC122718.2-201ENST00000505325 591 ntBASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB1Q9Y5F3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms