Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC138517.1-201ENST00000515724 568 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 SNORA74.1-201ENST00000516320 180 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC136777.2-201ENST00000522979 358 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 CYCSP25-201ENST00000525280 316 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC135983.3-201ENST00000528049 1226 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AP001357.1-201ENST00000586304 1053 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AC073046.2-201ENST00000604756 527 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 GUCY1B2-204ENST00000531898 1979 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 KYNUP3-201ENST00000574386 1341 ntBASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRAPPC4Q9Y296 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AP002512.4-202ENST00000641599 4530 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 MIR133A2-201ENST00000347538 102 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AL365220.1-201ENST00000432923 399 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 EMC3-AS1-205ENST00000438698 534 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 OR2L9P-201ENST00000444456 913 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 KF459542.1-201ENST00000450908 553 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC099670.1-201ENST00000455141 783 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 KHDC1P1-201ENST00000511053 508 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 RNA5SP418-201ENST00000515951 117 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC009120.3-201ENST00000563335 499 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 GLYATL1P2-202ENST00000588046 902 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC005479.3-201ENST00000602790 431 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC011891.2-201ENST00000604949 397 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC007603.3-201ENST00000636915 979 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC092692.1-201ENST00000623625 2595 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 NCOA4P2-201ENST00000340589 1813 ntBASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
TRAPPC4Q9Y296 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 RN7SKP38-201ENST00000410782 309 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 CYP4F30P-202ENST00000420048 405 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 RPL12P49-201ENST00000441100 121 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 POU5F1P5-201ENST00000445059 658 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC234771.2-201ENST00000445718 597 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC073476.1-201ENST00000452854 407 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC093719.1-201ENST00000480427 441 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 RN7SL284P-201ENST00000498823 275 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AC009729.1-201ENST00000548873 1133 ntBASIC5.72□□□□□ -1.49
TRAPPC4Q9Y296 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms