Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC005165.2-201ENST00000466070 380 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 RN7SL688P-201ENST00000471754 275 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 RPL23AP80-201ENST00000495605 424 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 MTND4LP22-201ENST00000508209 276 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 GTF2F2P1-201ENST00000511083 675 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC022447.1-201ENST00000515358 464 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 OR4V1P-201ENST00000525394 1140 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AP005119.2-201ENST00000579735 1105 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 EIF1-207ENST00000591776 797 ntTSL 4 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 TUSC7.1-201ENST00000610969 165 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC080112.3-201ENST00000612552 880 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 MIR6813-201ENST00000621638 56 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 FRG1KP-201ENST00000623592 341 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC010608.2-201ENST00000624830 470 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC097634.1-201ENST00000604491 2467 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 AC090132.1-201ENST00000524071 1480 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 TTC3P1-201ENST00000399586 6081 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 HSPA8P11-201ENST00000508840 1898 ntBASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC9.51□□□□□ -0.89
PDZRN3Q9UPQ7 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC125603.4-201ENST00000621942 2699 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC125232.1-201ENST00000452554 1408 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 U3.28-201ENST00000391249 210 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AL139806.1-201ENST00000403057 1002 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 EEF1A1P40-201ENST00000412883 573 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC004986.1-201ENST00000414855 607 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC023141.10-201ENST00000415634 200 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AL589794.1-201ENST00000424971 390 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 NANOGP2-201ENST00000435391 727 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 CASP3P1-201ENST00000446037 609 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC104978.1-201ENST00000449387 391 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 RN7SL836P-201ENST00000476140 296 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 MTCYBP19-201ENST00000517463 1124 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC090286.3-201ENST00000573133 187 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC007349.4-201ENST00000608114 532 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC092653.1-201ENST00000608509 531 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC004948.1-201ENST00000609858 672 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AC009159.1-201ENST00000618386 642 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 LINC01808-202ENST00000641680 1116 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 AL512353.3-201ENST00000417517 1326 ntBASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9.5□□□□□ -0.89
PDZRN3Q9UPQ7 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms