Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 AL445687.2-201ENST00000458156 728 ntBASIC5.92□□□□□ -1.46
CCDC88CQ9P219 AC073594.1-201ENST00000462065 364 ntBASIC5.92□□□□□ -1.46
CCDC88CQ9P219 RN7SL326P-201ENST00000477493 296 ntBASIC5.92□□□□□ -1.46
CCDC88CQ9P219 RNA5SP340-201ENST00000517132 107 ntBASIC5.92□□□□□ -1.46
CCDC88CQ9P219 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.92□□□□□ -1.46
CCDC88CQ9P219 FAM27E2-201ENST00000619668 403 ntBASIC5.92□□□□□ -1.46
CCDC88CQ9P219 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 AC074141.1-201ENST00000588129 2995 ntBASIC5.92□□□□□ -1.46
CCDC88CQ9P219 AL121768.1-201ENST00000613917 2544 ntBASIC5.92□□□□□ -1.46
CCDC88CQ9P219 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
CCDC88CQ9P219 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AP001541.1-201ENST00000623322 1904 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 MIR323B-201ENST00000385269 82 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC003989.1-201ENST00000434569 565 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 ATP5LP2-201ENST00000440646 311 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC005077.1-201ENST00000449226 375 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RN7SL221P-201ENST00000466190 281 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RN7SL643P-201ENST00000471845 291 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 MTND6P8-201ENST00000503471 522 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RPA2P3-201ENST00000533268 770 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC027229.1-201ENST00000583887 253 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AL096712.1-201ENST00000614561 159 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC022726.2-201ENST00000634673 547 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 HSPD1P8-201ENST00000400121 1658 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC105235.1-201ENST00000623208 1816 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RNA5SP350-201ENST00000363298 111 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RPL23AP18-201ENST00000416139 468 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 OR13K1P-201ENST00000444577 975 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RBMY2AP-201ENST00000445405 1157 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RBMY2CP-201ENST00000448575 1157 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RBMY2DP-202ENST00000448881 1157 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RBMY2BP-202ENST00000451071 1156 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 RANP2-201ENST00000456833 229 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AL355032.1-201ENST00000472981 438 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AL035690.1-201ENST00000490892 383 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC025458.1-201ENST00000506046 166 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 PRELID3BP3-201ENST00000584963 545 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 AC008507.3-201ENST00000585753 472 ntBASIC5.91□□□□□ -1.46
CCDC88CQ9P219 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CCDC88CQ9P219 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 AC119674.1-202ENST00000641333 1860 ntBASIC5.9□□□□□ -1.46
CCDC88CQ9P219 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CCDC88CQ9P219 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms