Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC020978.8-201ENST00000571975 3022 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 MIR30C1-201ENST00000385227 89 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 RPL26P37-201ENST00000411983 438 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL603650.1-201ENST00000412680 240 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC005534.2-201ENST00000431047 433 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC016908.1-201ENST00000442571 1219 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 RPL7P36-201ENST00000444633 681 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 GDI2P2-201ENST00000445131 608 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 RPS3AP17-201ENST00000472594 777 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 RN7SL864P-201ENST00000493457 285 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SUMO1P1-201ENST00000497904 306 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC010323.2-201ENST00000596405 594 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SLC6A21P-201ENST00000599458 369 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC012640.3-201ENST00000607847 430 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL357080.1-201ENST00000617394 239 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC025048.6-202ENST00000627667 438 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
CUEDC1Q9NWM3 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
CUEDC1Q9NWM3 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.84□□□□□ -1.16
CUEDC1Q9NWM3 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.84□□□□□ -1.16
CUEDC1Q9NWM3 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms