Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC020978.8-201ENST00000571975 3022 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 MIR30C1-201ENST00000385227 89 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 RPL26P37-201ENST00000411983 438 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL603650.1-201ENST00000412680 240 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC005534.2-201ENST00000431047 433 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC016908.1-201ENST00000442571 1219 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 RPL7P36-201ENST00000444633 681 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 GDI2P2-201ENST00000445131 608 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 RPS3AP17-201ENST00000472594 777 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 RN7SL864P-201ENST00000493457 285 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SUMO1P1-201ENST00000497904 306 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC010323.2-201ENST00000596405 594 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SLC6A21P-201ENST00000599458 369 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC012640.3-201ENST00000607847 430 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AL357080.1-201ENST00000617394 239 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 AC025048.6-202ENST00000627667 438 ntBASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
CUEDC1Q9NWM3 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
CUEDC1Q9NWM3 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
CUEDC1Q9NWM3 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.84□□□□□ -1.16
CUEDC1Q9NWM3 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.84□□□□□ -1.16
CUEDC1Q9NWM3 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.83□□□□□ -1.16
CUEDC1Q9NWM3 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms