Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 MTND5P12-201ENST00000502851 1449 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC003045.1-201ENST00000398779 713 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 RN7SKP146-201ENST00000410242 334 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC245884.2-201ENST00000426257 404 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AL445687.2-201ENST00000458156 728 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC026616.1-201ENST00000523157 525 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 RN7SL475P-201ENST00000583379 298 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AL589863.1-201ENST00000595383 631 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC027334.1-201ENST00000603257 310 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC012368.3-201ENST00000604190 219 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 NDUFB9P1-201ENST00000604683 510 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC005899.7-201ENST00000618199 588 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 MIR6823-201ENST00000622118 61 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 SSXP3-201ENST00000442971 1300 ntBASIC6.45□□□□□ -1.38
PCDH9Q9HC56 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PCDH9Q9HC56 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 RPL21P50-201ENST00000417698 477 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC002127.1-201ENST00000421305 225 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 FAM183DP-201ENST00000421987 399 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 ARMC4P1-201ENST00000438905 707 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 GTF2IP14-201ENST00000441415 586 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 GM2AP2-201ENST00000491764 562 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 IGHV4-55-201ENST00000520889 368 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 OR6M2P-201ENST00000529831 871 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 BTG1P1-201ENST00000540396 508 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC008055.1-201ENST00000547032 609 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC011891.2-201ENST00000604949 397 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC139426.3-201ENST00000605648 2059 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 ZNF101P1-201ENST00000435701 1720 ntBASIC6.44□□□□□ -1.38
PCDH9Q9HC56 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDH9Q9HC56 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.43□□□□□ -1.38
PCDH9Q9HC56 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PCDH9Q9HC56 YWHAZP4-201ENST00000392459 708 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms