Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 SPATA31C2-201ENST00000324915 3777 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC019072.1-201ENST00000604535 1551 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 Y_RNA.3-201ENST00000362331 103 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 Y_RNA.6-201ENST00000362350 114 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL353625.1-202ENST00000366273 571 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL663109.1-201ENST00000411498 844 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL390774.1-201ENST00000411924 246 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL161742.1-201ENST00000418154 584 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 GAPDHP51-201ENST00000426454 1000 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 FTH1P10-202ENST00000430907 550 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 ARL5AP3-201ENST00000439327 386 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC079781.1-201ENST00000441505 394 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL158214.1-201ENST00000444423 404 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC093799.1-201ENST00000452411 499 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 RN7SL180P-201ENST00000466769 294 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 TUBBP11-201ENST00000472255 252 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC079594.1-201ENST00000489757 331 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 CHCHD2P7-201ENST00000508008 452 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 FABP5P6-201ENST00000510588 409 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 RNU6-232P-201ENST00000517144 64 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 SEC11B-201ENST00000518383 499 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 OR5M4P-201ENST00000529436 925 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 NDUFA3P2-201ENST00000531434 232 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 NOP56P3-201ENST00000549457 385 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 CCDC58P1-201ENST00000578567 430 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC010327.2-201ENST00000587647 488 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 COX6CP16-201ENST00000603667 216 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 LARP7P1-201ENST00000605576 316 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC124312.6-202ENST00000623624 418 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC211433.3-201ENST00000623770 375 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC099667.1-201ENST00000624222 469 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AL356596.1-201ENST00000624230 379 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC097634.1-201ENST00000604491 2467 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 AC125232.1-201ENST00000452554 1408 ntBASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSBP3Q9BWW4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.06□□□□□ -1.44
SSBP3Q9BWW4 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 415.5 ms