Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL133243.2-201ENST00000610331 1621 ntBASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 ABCA11P-202ENST00000504019 2110 ntBASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 RNA5SP110-201ENST00000362638 115 ntBASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 RPS3P2-201ENST00000421346 701 ntBASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC079905.1-201ENST00000549280 475 ntBASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC092692.1-201ENST00000623625 2595 ntBASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 AC129915.3-201ENST00000634128 948 ntBASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RPAP1Q9BWH6 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC018717.1-201ENST00000457712 1505 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 MTCO1P28-201ENST00000574177 1528 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 RN7SKP78-201ENST00000364711 318 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 MIR130B-202ENST00000385018 82 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 UBE2V1P14-201ENST00000415815 558 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 IPPKP1-201ENST00000422501 768 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC130360.1-201ENST00000425489 1117 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AL022237.1-201ENST00000446663 358 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 MORF4-201ENST00000447135 971 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AL133351.3-201ENST00000454998 193 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 RPL7P51-201ENST00000490532 749 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC130365.2-201ENST00000525882 1201 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 AC027279.1-201ENST00000568885 4284 ntBASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RPAP1Q9BWH6 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 AC023490.2-201ENST00000359859 470 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 SUGT1P2-201ENST00000379452 992 ntBASIC7.55□□□□□ -1.2
RPAP1Q9BWH6 LYPLA1P3-201ENST00000402650 695 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms